RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CELA2BP08218 269 aaPredicted RBP20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 FAM228BP0C875 321 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 CR2P20023 1033 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 TRIM23P36406 574 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 MMP13P45452 471 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 CCDC173Q0VFZ6 552 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 SPIDRQ14159 915 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 ACOX1Q15067 660 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 CCDC122Q5T0U0 273 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 MARC1Q5VT66 337 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 PLA2G15Q8NCC3 412 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 PDCD6IPQ8WUM4 868 aaKnown RBP20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 FUBP1Q96AE4 644 aaKnown RBP20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 LGMNQ99538 433 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 WDR26Q9H7D7 661 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 SIRPGQ9P1W8 387 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 B4GALT6Q9UBX8 382 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 PHTF1Q9UMS5 762 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 BPTFQ12830 3046 aa20.42■□□□□ 0.86
PDLIM4-206ENST00000474421 CPP00450 1065 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 CYP2A6P11509 494 aaPredicted RBP20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 KRT10P13645 584 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 RBMS1P29558 406 aaKnown RBP20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 VIPR1P32241 457 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 SSR1P43307 286 aaKnown RBP20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 TSR1Q2NL82 804 aaKnown RBP20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 TXNRD3NBQ6F5E7 133 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 PNCKQ6P2M8 343 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 CRTC1Q6UUV9 634 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 KYQ8NBH2 561 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 PDXPQ96GD0 296 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 ATXN7L3BQ96GX2 97 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 CRELD1Q96HD1 420 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 HIC2Q96JB3 615 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 BTBD6Q96KE9 485 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 UBL7Q96S82 380 aaPredicted RBP20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 PRORYQ9H606 182 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 NOD2Q9HC29 1040 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 HAUS2Q9NVX0 235 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 LCMT1Q9UIC8 334 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 SATB2Q9UPW6 733 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 PCDHGC4Q9Y5F7 938 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 ENTPD2Q9Y5L3 495 aa20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 COL27A1Q8IZC6 1860 aaPredicted RBP20.41■□□□□ 0.86
PDLIM4-206ENST00000474421 EIF4E1BA6NMX2 242 aaKnown RBP20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 A8MX80 341 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 TMX2-CTNND1H3BSU7 103 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 GYPCP04921 128 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 MLLT3P42568 568 aaPredicted RBP20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 TLE3Q04726 772 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 C3orf38Q5JPI3 329 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 BROXQ5VW32 411 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 SPACA3Q8IXA5 215 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 NDUFAF2Q8N183 169 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 PGBD5Q8N414 524 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 ZNF564Q8TBZ8 553 aaPredicted RBP20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 FAM71BQ8TC56 605 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 OR1E3Q8WZA6 343 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 NUS1Q96E22 293 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 COQ10AQ96MF6 247 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 NSMCE3Q96MG7 304 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 IFNKQ9P0W0 207 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 PCDHGA8Q9Y5G5 932 aa20.4■□□□□ 0.86
PDLIM4-206ENST00000474421 TTC24A2A3L6 582 aaPredicted RBP20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 TMEM202A6NGA9 273 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 PSMD11O00231 422 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 NTN3O00634 580 aaPredicted RBP20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 HEXIM1O94992 359 aaKnown RBP20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 GM2AP17900 193 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 UCNP55089 124 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 COL9A2Q14055 689 aaPredicted RBP20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 ARMC12Q5T9G4 340 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 USP45Q70EL2 814 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 TAF8Q7Z7C8 310 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 TEX26Q8N6G2 289 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 WDR36Q8NI36 951 aaKnown RBP20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 CCDC74AQ96AQ1 378 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 FCRL3Q96P31 734 aaPredicted RBP20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 SYNDIG1Q9H7V2 258 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 FGF22Q9HCT0 170 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 ASCL3Q9NQ33 180 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 PHPT1Q9NRX4 125 aaPredicted RBP20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 UVRAGQ9P2Y5 699 aa20.39■□□□□ 0.85
PDLIM4-206ENST00000474421 SMG1Q96Q15 3661 aaKnown RBP20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 KIF26BQ2KJY2 2108 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 PGLSO95336 258 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 MYCLP1P12525 358 aaPredicted RBP20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 CES1P23141 567 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 IL4RP24394 825 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 HNRNPH3P31942 346 aaKnown RBP20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 ARHGEF7Q14155 803 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 TCEA2Q15560 299 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 CNGA3Q16281 694 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 TIGD7Q6NT04 549 aaPredicted RBP20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 MAP7D3Q8IWC1 876 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 ARL14Q8N4G2 192 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 CCDC97Q96F63 343 aaPredicted RBP20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 SCRN2Q96FV2 425 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 SLC46A1Q96NT5 459 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms