RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 C1orf216Q8TAB5 229 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 CCDC110Q8TBZ0 833 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 SNX19Q92543 992 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 NKD2Q969F2 451 aaPredicted RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 IMP4Q96G21 291 aaKnown RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 ZC3H10Q96K80 434 aaKnown RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 CAPZA3Q96KX2 299 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 SPATA13Q96N96 652 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 TMEM121Q9BTD3 319 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 TDRD1Q9BXT4 1180 aaKnown RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 KRTAP4-6Q9BYQ5 205 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 FRMD8P1Q9BZ68 369 aaPredicted RBP9.15□□□□□ -0.94
SMC4-214ENST00000472991 ALG2Q9H553 416 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 USP29Q9HBJ7 922 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 RSPH14Q9UHP6 348 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 PCDHGA11Q9Y5H2 935 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 RAI2Q9Y5P3 530 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 WDR87Q6ZQQ6 2873 aa9.15□□□□□ -0.94
SMC4-214ENST00000472991 ZFC3H1O60293 1989 aaKnown RBP9.15□□□□□ -0.95
SMC4-214ENST00000472991 KNL1Q8NG31 2342 aa9.15□□□□□ -0.95
SMC4-214ENST00000472991 PLXNB3Q9ULL4 1909 aa9.15□□□□□ -0.95
SMC4-214ENST00000472991 LAMA1P25391 3075 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 FAM186AA6NE01 2351 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 TBC1D3DA0A087WVF3 549 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 TBC1D3IA0A087WXS9 549 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 TBC1D3EA0A087X179 549 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 TBC1D3KA0A087X1G2 549 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 CFAP69A5D8W1 941 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 TBC1D3FA6NER0 549 aaPredicted RBP9.14□□□□□ -0.95
SMC4-214ENST00000472991 SHISA8B8ZZ34 492 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 TBC1D3LB9A6J9 549 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 CES2O00748 559 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 AP1G1O43747 822 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 RNGTTO60942 597 aaKnown RBP9.14□□□□□ -0.95
SMC4-214ENST00000472991 ZNF189O75820 626 aaPredicted RBP9.14□□□□□ -0.95
SMC4-214ENST00000472991 FSBPO95073 299 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 PCDH8O95206 1070 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 EPN2O95208 641 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 PGLSO95336 258 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 IGHA1P01876 353 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 LMNAP02545 664 aaKnown RBP9.14□□□□□ -0.95
SMC4-214ENST00000472991 PDHA1P08559 390 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 TBC1D3HP0C7X1 549 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 ITIH2P19823 946 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 CA4P22748 312 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 PSMB4P28070 264 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 CASQ1P31415 396 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 SEMG2Q02383 582 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 SLC14A2Q15849 920 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 CCNG2Q16589 344 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 UGP2Q16851 508 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 ARMC12Q5T9G4 340 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 LYSMD4Q5XG99 296 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 KIAA0895LQ68EN5 471 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 TBC1D3GQ6DHY5 549 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 ITPRIPL1Q6GPH6 555 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 TBC1D3CQ6IPX1 549 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 TTC7BQ86TV6 843 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 PRPF39Q86UA1 669 aaKnown RBP9.14□□□□□ -0.95
SMC4-214ENST00000472991 TBC1D3Q8IZP1 549 aaPredicted RBP9.14□□□□□ -0.95
SMC4-214ENST00000472991 PRELID2Q8N945 189 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 CADM4Q8NFZ8 388 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 SPATA22Q8NHS9 363 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 ACTRT1Q8TDG2 376 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 HCAR2Q8TDS4 363 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 RAB7BQ96AH8 199 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 OXNAD1Q96HP4 312 aaPredicted RBP9.14□□□□□ -0.95
SMC4-214ENST00000472991 FCRL5Q96RD9 977 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 NAP1L3Q99457 506 aaPredicted RBP9.14□□□□□ -0.95
SMC4-214ENST00000472991 AP1M1Q9BXS5 423 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 PCED1AQ9H1Q7 454 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 GBA3Q9H227 469 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 SEMA4AQ9H3S1 761 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 PREBQ9HCU5 417 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 PCDH12Q9NPG4 1184 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 UBP1Q9NZI7 540 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 GDF2Q9UK05 429 aaPredicted RBP9.14□□□□□ -0.95
SMC4-214ENST00000472991 TRHDEQ9UKU6 1024 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 TTC7AQ9ULT0 858 aaPredicted RBP9.14□□□□□ -0.95
SMC4-214ENST00000472991 ZNF148Q9UQR1 794 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 CHKBQ9Y259 395 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 FADS3Q9Y5Q0 445 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 SAR1BQ9Y6B6 198 aa9.14□□□□□ -0.95
SMC4-214ENST00000472991 A0A1W2PQ67 120 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 A0A1W2PQU0 124 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 C5orf60A6NFR6 353 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 METTL12A8MUP2 240 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 C10orf142B7Z368 130 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 PROB1E7EW31 1015 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 NEMP1O14524 444 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 AREL1O15033 823 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 FZD6O60353 706 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 OPHN1O60890 802 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 PMPCBO75439 489 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 IFNB1P01574 187 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 IGHV4-34P06331 123 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 PRLRP16471 622 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 CTPS1P17812 591 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 ITPKAP23677 461 aa9.13□□□□□ -0.95
SMC4-214ENST00000472991 MAOBP27338 520 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms