RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 BIRC2Q13490 618 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 RBM39Q14498 530 aaKnown RBP1.44□□□□□ -2.18
UBXN4-207ENST00000471246 NEDD9Q14511 834 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 VEPH1Q14D04 833 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 TAF11Q15544 211 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 CTF1Q16619 201 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 MRGPRG-AS1Q2M3A8 158 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 EIF2S3LQ2VIR3 472 aaKnown RBP1.44□□□□□ -2.18
UBXN4-207ENST00000471246 WDR45BQ5MNZ6 344 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 LCE1CQ5T751 118 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 LCE1BQ5T7P3 118 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 ANKRD54Q6NXT1 300 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 TMEM81Q6P7N7 255 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 SLC22A25Q6T423 547 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 LCTLQ6UWM7 567 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 GDPD4Q6W3E5 623 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 LDHAL6AQ6ZMR3 332 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 MTSS1LQ765P7 747 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 MARK2Q7KZI7 788 aaKnown RBP1.44□□□□□ -2.18
UBXN4-207ENST00000471246 TADA2BQ86TJ2 420 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 SLC9B2Q86UD5 537 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 SATL1Q86VE3 508 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 LRRTM4Q86VH4 590 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 TMTC1Q8IUR5 882 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 CPOQ8IVL8 374 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 FOXRED2Q8IWF2 684 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 ODF3L1Q8IXM7 274 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 SLC35F3Q8IY50 421 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 DSELQ8IZU8 1212 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 KCNH5Q8NCM2 988 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 AGBL3Q8NEM8 1001 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 TNIP2Q8NFZ5 429 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 OR2AK2Q8NG84 335 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 BBS10Q8TAM1 723 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 HERVK_113Q902F9 699 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 BBS4Q96RK4 519 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 KXD1Q9BQD3 176 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 HEMGNQ9BXL5 484 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 INTS2Q9H0H0 1204 aaKnown RBP1.44□□□□□ -2.18
UBXN4-207ENST00000471246 CSTL1Q9H114 145 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 ESRP2Q9H6T0 727 aaKnown RBP1.44□□□□□ -2.18
UBXN4-207ENST00000471246 C20orf141Q9NUB4 165 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 ABCF3Q9NUQ8 709 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 BABAM1Q9NWV8 329 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 HSPB7Q9UBY9 170 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 GPR52Q9Y2T5 361 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 NFE2L3Q9Y4A8 694 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 STON1Q9Y6Q2 735 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 CGNL1Q0VF96 1302 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 ATXN2Q99700 1313 aaKnown RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 TEX13CA0A0J9YWL9 993 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 GOLGA6L10A0A0M3HER8 536 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 A0A1B0GVY2 172 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 C16orf97H3BN30 126 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 IFNL4K9M1U5 179 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 EIF3FO00303 357 aaPredicted RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 P2RY10O00398 339 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 LDLRAD4O15165 306 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 FGF17O60258 216 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 PIP5K1CO60331 668 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 TACC1O75410 805 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 MT-CYBP00156 380 aaPredicted RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 CRYAAP02489 173 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 URODP06132 367 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 HEXAP06865 529 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 GALTP07902 379 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 MMP2P08253 660 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 G6PDP11413 515 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 CETPP11597 493 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 CDH1P12830 882 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 HLA-DOBP13765 273 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 ITGA2P17301 1181 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 AGAP20933 346 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 ANOS1P23352 680 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 PSMC2P35998 433 aaKnown RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 PGM1P36871 562 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 TMPOP42166 694 aaKnown RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 HALP42357 657 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 CLCNKAP51800 687 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 SEC61BP60468 96 aaKnown RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 PHEXP78562 749 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 RNPS1Q15287 305 aaKnown RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 NFIL3Q16649 462 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 TCTN1Q2MV58 587 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 ACCSLQ4AC99 568 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 ZNF766Q5HY98 468 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 LCE3CQ5T5A8 94 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 PMS2CLQ68D20 193 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 HIST2H2BCQ6DN03 193 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 HIST2H2BDQ6DRA6 164 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 RGMBQ6NW40 437 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 ZNF449Q6P9G9 518 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 SLC36A4Q6YBV0 504 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 KRBA2Q6ZNG9 492 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 TRMT1LQ7Z2T5 733 aaKnown RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 TDRPQ86YL5 185 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 CHERPQ8IWX8 916 aaKnown RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 DHX40Q8IX18 779 aaKnown RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 CIARTQ8N365 385 aaPredicted RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 ZBTB2Q8N680 514 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms