RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 KRT10P13645 584 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 ETFAP13804 333 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 IL7RP16871 459 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 ACSL1P33121 698 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 CHAF1BQ13112 559 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 IRF3Q14653 427 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 CRYMQ14894 314 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 DUSP6Q16828 381 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 TCTN1Q2MV58 587 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 GKAP1Q5VSY0 366 aaPredicted RBP5.25□□□□□ -1.57
LSM5-209ENST00000468872 SARM1Q6SZW1 724 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 QSOX2Q6ZRP7 698 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 C9orf47Q6ZRZ4 202 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 COLCA1Q6ZS62 124 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 TRILQ7L0X0 811 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 CHST9Q7L1S5 443 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 GSTA5Q7RTV2 222 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 GALNT5Q7Z7M9 940 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 SLC35F3Q8IY50 421 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 ADGRF2Q8IZF7 708 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 TEX45Q8NA69 505 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 BICD2Q8TD16 824 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 GPT2Q8TD30 523 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 POMGNT1Q8WZA1 660 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 FBXL8Q96CD0 374 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 SERINC2Q96SA4 455 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 POLDIP3Q9BY77 421 aaKnown RBP5.25□□□□□ -1.57
LSM5-209ENST00000468872 TASP1Q9H6P5 420 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 SH2D4AQ9H788 454 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 BPIFA1Q9NP55 256 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 RRP7BPQ9NSQ0 103 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 ZBTB40Q9NUA8 1239 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 POLG2Q9UHN1 485 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 RPS6KL1Q9Y6S9 549 aa5.25□□□□□ -1.57
LSM5-209ENST00000468872 FAM237AA0A1B0GTK4 181 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 GAGE12JA6NER3 117 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 B4DGG1 531 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 RGS11O94810 467 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 NKX2-2O95096 273 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 NDUFB8O95169 186 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 EPN2O95208 641 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 KLKB1P03952 638 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 ALPLP05186 524 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 MCM3P25205 808 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 CDH8P55286 799 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 SELENOVP59797 346 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 PRAMEP78395 509 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 NUCB1Q02818 461 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 DRAP1Q14919 205 aaPredicted RBP5.24□□□□□ -1.57
LSM5-209ENST00000468872 ARHGEF6Q15052 776 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 SHBQ15464 509 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 Q5PR19 223 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 TMEM154Q6P9G4 183 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 SLC16A12Q6ZSM3 486 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 MMP21Q8N119 569 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 INPP5DQ92835 1189 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 ERP27Q96DN0 273 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 MARK4Q96L34 752 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 C1QTNF5Q9BXJ0 243 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 FAM234AQ9H0X4 552 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 PLSCR4Q9NRQ2 329 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 RAI2Q9Y5P3 530 aa5.24□□□□□ -1.57
LSM5-209ENST00000468872 TMEM272A0A1B0GTI8 110 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 CHL1O00533 1208 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 TSPAN9O75954 239 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 FGF2P09038 288 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 CBSLP0DN79 551 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 CBSP35520 551 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 THBS3P49746 956 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 SNX16P57768 344 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 HAPLN4Q86UW8 402 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 OR8H2Q8N162 312 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 C17orf53Q8N3J3 647 aaPredicted RBP5.23□□□□□ -1.57
LSM5-209ENST00000468872 HUS1BQ8NHY5 278 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 SLC35F5Q8WV83 523 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 ZKSCAN4Q969J2 545 aaPredicted RBP5.23□□□□□ -1.57
LSM5-209ENST00000468872 ARHGEF26Q96DR7 871 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 CALML4Q96GE6 196 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 MXD3Q9BW11 206 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 SMARCAD1Q9H4L7 1026 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 PDZD7Q9H5P4 517 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 RANGRFQ9HD47 186 aaPredicted RBP5.23□□□□□ -1.57
LSM5-209ENST00000468872 CYSLTR2Q9NS75 346 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 DECR2Q9NUI1 292 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 CEPT1Q9Y6K0 416 aa5.23□□□□□ -1.57
LSM5-209ENST00000468872 PGM3O95394 542 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 MMP2P08253 660 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 CLTBP09497 229 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 AKR1B1P15121 316 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 GABRB1P18505 474 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 TNFRSF1BP20333 461 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 HTR6P50406 440 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 CLCN3P51790 818 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 NANOS2P60321 138 aaKnown RBP5.22□□□□□ -1.57
LSM5-209ENST00000468872 EPS8Q12929 822 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 AIMP2Q13155 320 aaKnown RBP5.22□□□□□ -1.57
LSM5-209ENST00000468872 ITGADQ13349 1161 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 ASTE1Q2TB18 679 aaPredicted RBP5.22□□□□□ -1.57
LSM5-209ENST00000468872 ODF3L2Q3SX64 289 aa5.22□□□□□ -1.57
LSM5-209ENST00000468872 KIAA0930Q6ICG6 404 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms