RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ZNF140P52738 457 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-208ENST00000468300 QPCTQ16769 361 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 PARM1Q6UWI2 310 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 TIFABQ6ZNK6 161 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 NEK10Q6ZWH5 1172 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 RASSF3Q86WH2 238 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 SPNS2Q8IVW8 549 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 C10orf67Q8IYJ2 551 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 IPCEF1Q8WWN9 437 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-208ENST00000468300 NXPE3Q969Y0 559 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 ISG20Q96AZ6 181 aaKnown RBP8.3□□□□□ -1.08
BRCA1-208ENST00000468300 RMDN2Q96LZ7 410 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 KLF6Q99612 283 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-208ENST00000468300 SLC2A11Q9BYW1 496 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 SSU72Q9NP77 194 aaKnown RBP8.3□□□□□ -1.08
BRCA1-208ENST00000468300 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-208ENST00000468300 SLC27A6Q9Y2P4 619 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 PLXNB3Q9ULL4 1909 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 ANKRD66B4E2M5 251 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 PRRT4C9JH25 899 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 SPAG7O75391 227 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 ALADP13716 330 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 BRAFP15056 766 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 HOXB8P17481 243 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-208ENST00000468300 RPA3P35244 121 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-208ENST00000468300 SLC18A1P54219 525 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 RHOAP61586 193 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 ZNF789Q5FWF6 425 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 RALGPS1Q5JS13 557 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 KIAA0930Q6ICG6 404 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-208ENST00000468300 RETSATQ6NUM9 610 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 CAMK1DQ8IU85 385 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 DENND6AQ8IWF6 608 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 CTAGE3PQ8IX95 158 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 PPHLN1Q8NEY8 458 aaKnown RBP8.3□□□□□ -1.08
BRCA1-208ENST00000468300 ECHDC3Q96DC8 303 aa8.3□□□□□ -1.08
BRCA1-208ENST00000468300 PDE4DIPQ5VU43 2346 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 TCF20Q9UGU0 1960 aaKnown RBP8.29□□□□□ -1.08
BRCA1-208ENST00000468300 HEATR9A2RTY3 570 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 TRIM49D1C9J1S8 452 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 TULP3O75386 442 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 VAPBO95292 243 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 PGLSO95336 258 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 TOP3BO95985 862 aaKnown RBP8.29□□□□□ -1.08
BRCA1-208ENST00000468300 AHSGP02765 367 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 IMPDH2P12268 514 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 LAMP2P13473 410 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 ECT2LQ008S8 904 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 NR1H3Q13133 447 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 NAB1Q13506 487 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 SEMA3AQ14563 771 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 PDCD2Q16342 344 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-208ENST00000468300 MBLAC2Q68D91 279 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 C22orf39Q6P5X5 142 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 SMRP1Q8NCR6 262 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 BRSK1Q8TDC3 778 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 CYB5D2Q8WUJ1 264 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 RBBP8Q99708 897 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 SH3GL3Q99963 347 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 CAPS2Q9BXY5 557 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 STMN4Q9H169 189 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-208ENST00000468300 ECT2Q9H8V3 914 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 IARS2Q9NSE4 1012 aaKnown RBP8.29□□□□□ -1.08
BRCA1-208ENST00000468300 C20orf96Q9NUD7 363 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-208ENST00000468300 ERVW-1Q9UQF0 538 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 OR51F1A6NGY5 319 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 GOLGA8RI6L899 631 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 SLC9A3R1O14745 358 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-208ENST00000468300 BUD23O43709 281 aaKnown RBP8.29□□□□□ -1.08
BRCA1-208ENST00000468300 GSRP00390 522 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 INHBAP08476 426 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 ITGA2BP08514 1039 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 MSL3P1P0C860 447 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 PYGBP11216 843 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 OPRD1P41143 372 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 ETV4P43268 484 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 ABCG1P45844 678 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 PGGT1BP53609 377 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 MROH9Q5TGP6 573 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 PDPK2PQ6A1A2 396 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 FSTL4Q6MZW2 842 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 AHI1Q8N157 1196 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 BBS5Q8N3I7 341 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 C2CD4AQ8NCU7 369 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-208ENST00000468300 OR2AP1Q8NGE2 309 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 OR13C4Q8NGS5 318 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 OR2A12Q8NGT7 310 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 SUSD6Q92537 303 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 IFT43Q96FT9 208 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 CPNE1Q99829 537 aa8.29□□□□□ -1.08
BRCA1-208ENST00000468300 PPANQ9NQ55 473 aaKnown RBP8.29□□□□□ -1.08
BRCA1-208ENST00000468300 MARCH4Q9P2E8 410 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-208ENST00000468300 TTC34A8MYJ7 566 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 ASMTLO95671 621 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 RECKO95980 971 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 CTSLP07711 333 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 ATP5DP30049 168 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 LSP1P33241 339 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 CA5AP35218 305 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 SLC1A2P43004 574 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms