RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ITGA8P53708 1063 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 FAM193AP78312 1265 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 PDE1BQ01064 536 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 OLIG2Q13516 323 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 LAMB3Q13751 1172 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 ARHGEF7Q14155 803 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 KCTD19Q17RG1 926 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-205ENST00000466897 LRRC73Q5JTD7 316 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 SYCP2LQ5T4T6 812 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 CRTC1Q6UUV9 634 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 LIPIQ6XZB0 460 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 FAM124AQ86V42 546 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 HORMAD1Q86X24 394 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 SLC25A41Q8N5S1 370 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 DNAAF3Q8N9W5 541 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 OR52K1Q8NGK4 314 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 BRSK1Q8TDC3 778 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 CXorf40AQ8TE69 158 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 SERPINB12Q96P63 405 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 RANBP9Q96S59 729 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 APOL2Q9BQE5 337 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 DUSP15Q9H1R2 295 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-205ENST00000466897 GRHL1Q9NZI5 618 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 RAPGEFL1Q9UHV5 662 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 GGT7Q9UJ14 662 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 ITM2BQ9Y287 266 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 SNX24Q9Y343 169 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 ZNF711Q9Y462 761 aa15.22■□□□□ 0.03
NPHP4-205ENST00000466897 TBC1D3DA0A087WVF3 549 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TBC1D3IA0A087WXS9 549 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TBC1D3EA0A087X179 549 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TBC1D3KA0A087X1G2 549 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 C1orf232A0A0U1RR37 186 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 RGSL1A5PLK6 1076 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TBC1D3FA6NER0 549 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TBC1D3LB9A6J9 549 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 NDUFS2O75306 463 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 PPFIA2O75334 1257 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 PRKCGP05129 697 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TBC1D3HP0C7X1 549 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 GRIA1P42261 906 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 NPY2RP49146 381 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 STC1P52823 247 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 MRPS25P82663 173 aaKnown RBP15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TAF1AQ15573 450 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-205ENST00000466897 CNGA3Q16281 694 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 LRRC66Q68CR7 880 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 KIAA0895LQ68EN5 471 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TBC1D3GQ6DHY5 549 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TBC1D3CQ6IPX1 549 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 ZC3H14Q6PJT7 736 aaKnown RBP15.21■□□□□ 0.03
NPHP4-205ENST00000466897 CYP2U1Q7Z449 544 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TMC3Q7Z5M5 1100 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 CAND1Q86VP6 1230 aaKnown RBP15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TBC1D3Q8IZP1 549 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-205ENST00000466897 ABCA7Q8IZY2 2146 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 FAM160A2Q8N612 972 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-205ENST00000466897 LRRN4CLQ8ND94 238 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 PTCD2Q8WV60 388 aaKnown RBP15.21■□□□□ 0.03
NPHP4-205ENST00000466897 RUBCNQ92622 972 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 FOXJ1Q92949 421 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 PEX13Q92968 403 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 ZC3H10Q96K80 434 aaKnown RBP15.21■□□□□ 0.03
NPHP4-205ENST00000466897 GPR174Q9BXC1 333 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 C1QTNF2Q9BXJ5 285 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TRIM31Q9BZY9 425 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 PHACTR1Q9C0D0 580 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 IL22Q9GZX6 179 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 CDH19Q9H159 772 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 IRF2BPLQ9H1B7 796 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 ZFYVE1Q9HBF4 777 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 FAM114A2Q9NRY5 505 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 BFARQ9NZS9 450 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 NFKBIL1Q9UBC1 381 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-205ENST00000466897 DMGDHQ9UI17 866 aaKnown RBP15.21■□□□□ 0.03
NPHP4-205ENST00000466897 ANAPC5Q9UJX4 755 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 RIMKLBQ9ULI2 386 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 SPO11Q9Y5K1 396 aa15.21■□□□□ 0.03
NPHP4-205ENST00000466897 TP53BP1Q12888 1972 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-205ENST00000466897 METTL12A8MUP2 240 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 HRO43593 1189 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 RNGTTO60942 597 aaKnown RBP15.2■□□□□ 0.02
NPHP4-205ENST00000466897 TM7SF2O76062 418 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 PCDH8O95206 1070 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 CRTAMO95727 393 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 C6P13671 934 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 BCKDHBP21953 392 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 PSMA3P25788 255 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 LIG3P49916 1009 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 SLC7A5Q01650 507 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 GUCY2DQ02846 1103 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 RPL6Q02878 288 aaKnown RBP15.2■□□□□ 0.02
NPHP4-205ENST00000466897 PTSQ03393 145 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 ZNF284Q2VY69 593 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 ZDHHC20Q5W0Z9 365 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 LYSMD3Q7Z3D4 306 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 GLT6D1Q7Z4J2 308 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 TSPAN33Q86UF1 283 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 TTC30BQ8N4P2 665 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 FRMD1Q8N878 549 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms