RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 MOCOSQ96EN8 888 aa18.32■□□□□ 0.52
COL9A3-205ENST00000466192 GBF1Q92538 1859 aa18.32■□□□□ 0.52
COL9A3-205ENST00000466192 K7ERQ8 282 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 RPP40O75818 363 aaKnown RBP18.31■□□□□ 0.52
COL9A3-205ENST00000466192 COL6A2P12110 1019 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 CRABP2P29373 138 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 ALDH18A1P54886 795 aaKnown RBP18.31■□□□□ 0.52
COL9A3-205ENST00000466192 SLC12A2P55011 1212 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 DLG1Q12959 904 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 CAMK1Q14012 370 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 MPPE1Q53F39 396 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 FSTL5Q8N475 847 aaPredicted RBP18.31■□□□□ 0.52
COL9A3-205ENST00000466192 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.31■□□□□ 0.52
COL9A3-205ENST00000466192 LPCAT1Q8NF37 534 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 MDGA1Q8NFP4 955 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 STYXQ8WUJ0 223 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 SREK1Q8WXA9 508 aaKnown RBP18.31■□□□□ 0.52
COL9A3-205ENST00000466192 NXNL1Q96CM4 212 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 GPR78Q96P69 363 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 OLFM1Q99784 485 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 ACSS2Q9NR19 701 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 MAN1C1Q9NR34 630 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 OXSMQ9NWU1 459 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 RIMKLBQ9ULI2 386 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 ARHGAP26Q9UNA1 814 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 MOSPD3O75425 235 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 APOA4P06727 396 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 PFKLP17858 780 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 CLCN5P51795 746 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 ZNF140P52738 457 aaPredicted RBP18.31■□□□□ 0.52
COL9A3-205ENST00000466192 EPHA5P54756 1037 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 RHOAP61586 193 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 KRT72Q14CN4 511 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 MPP7Q5T2T1 576 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 ATXN7L2Q5T6C5 722 aaPredicted RBP18.31■□□□□ 0.52
COL9A3-205ENST00000466192 GPR158Q5T848 1215 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 LCA5Q86VQ0 697 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 LONP2Q86WA8 852 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 LMNTD2Q8IXW0 634 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 RIN3Q8TB24 985 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 SH3RF2Q8TEC5 729 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 SIKE1Q9BRV8 207 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 TACO1Q9BSH4 297 aaKnown RBP18.31■□□□□ 0.52
COL9A3-205ENST00000466192 TUBB6Q9BUF5 446 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 CD248Q9HCU0 757 aa18.31■□□□□ 0.52
COL9A3-205ENST00000466192 HNRNPCL1O60812 293 aaKnown RBP18.3■□□□□ 0.52
COL9A3-205ENST00000466192 CRTAMO95727 393 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 HSPA4LO95757 839 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 GLP2RO95838 553 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 ESRRAP11474 423 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-205ENST00000466192 MYOGP15173 224 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 LMAN2Q12907 356 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 RIPK1Q13546 671 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 SEMA3AQ14563 771 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 LRRC8EQ6NSJ5 796 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 MAVSQ7Z434 540 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 PDCD6IPQ8WUM4 868 aaKnown RBP18.3■□□□□ 0.52
COL9A3-205ENST00000466192 CDKN2AIPNLQ96HQ2 116 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 MIPEPQ99797 713 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 GATA5Q9BWX5 397 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-205ENST00000466192 NLE1Q9NVX2 485 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-205ENST00000466192 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-205ENST00000466192 MID2Q9UJV3 735 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 ANKRD66B4E2M5 251 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 GRM6O15303 877 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 CD3EAPO15446 510 aaKnown RBP18.3■□□□□ 0.52
COL9A3-205ENST00000466192 SMAD6O43541 496 aaKnown RBP18.3■□□□□ 0.52
COL9A3-205ENST00000466192 CCDC22O60826 627 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 KLHL2O95198 593 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 EPCAMP16422 314 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 CALB2P22676 271 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 SLC8A1P32418 973 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 CD70P32970 193 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 USP4Q13107 963 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 PTPRRQ15256 657 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 TEAD2Q15562 447 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 VWA5B1Q5TIE3 1220 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 ZYG11AQ6WRX3 759 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 GLT6D1Q7Z4J2 308 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 TREML1Q86YW5 311 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 ZNF781Q8N8C0 355 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 GPR150Q8NGU9 434 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 AGR3Q8TD06 166 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 C2orf49Q9BVC5 232 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-205ENST00000466192 XPR1Q9UBH6 696 aa18.3■□□□□ 0.52
COL9A3-205ENST00000466192 CAPN14A8MX76 684 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 TARM1B6A8C7 271 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 ENO1P06733 434 aaKnown RBP18.29■□□□□ 0.52
COL9A3-205ENST00000466192 SERPINA6P08185 405 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 PTPN2P17706 415 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 TAF1AQ15573 450 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-205ENST00000466192 SLC5A9Q2M3M2 681 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 HECTD2Q5U5R9 776 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 LIPMQ5VYY2 423 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 FAM91A1Q658Y4 838 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 CMTM8Q8IZV2 173 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 OR4K2Q8NGD2 314 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 OR4L1Q8NH43 312 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 FIBINQ8TAL6 211 aa18.29■□□□□ 0.52
COL9A3-205ENST00000466192 RDH11Q8TC12 318 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms