RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 MSNP26038 577 aaKnown RBP20.38■□□□□ 0.85
SKA3-205ENST00000465471 HNF1BP35680 557 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 GDF10P55107 478 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 CDK18Q07002 472 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 QPCTQ16769 361 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 STPG1Q5TH74 334 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 ITPRIPL1Q6GPH6 555 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 IL27RAQ6UWB1 636 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 ADAT2Q7Z6V5 191 aaKnown RBP20.38■□□□□ 0.85
SKA3-205ENST00000465471 TSPAN33Q86UF1 283 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 KLHDC8BQ8IXV7 354 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 NDUFAF2Q8N183 169 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 MINDY1Q8N5J2 469 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 LPCAT1Q8NF37 534 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 SKA1Q96BD8 255 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 C1QTNF7Q9BXJ2 289 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 ADGRE3Q9BY15 652 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 DNAAF2Q9NVR5 837 aaKnown RBP20.38■□□□□ 0.85
SKA3-205ENST00000465471 RSPH14Q9UHP6 348 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 TTC7AQ9ULT0 858 aaPredicted RBP20.38■□□□□ 0.85
SKA3-205ENST00000465471 SNX11Q9Y5W9 270 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 LOC285095A0A1B0GVY8 99 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 POM121BA6NF01 834 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 A6NNZ2 444 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 ANKRD66B4E2M5 251 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 CEP104O60308 925 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 STK10O94804 968 aaKnown RBP20.37■□□□□ 0.85
SKA3-205ENST00000465471 IGFALSP35858 605 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 EPHB1P54762 984 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 CLDN2P57739 230 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 PFN3P60673 137 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 MPP3Q13368 585 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 CDKN3Q16667 212 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 ZNF423Q2M1K9 1284 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 WSCD2Q2TBF2 565 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 DRICH1Q6PGQ1 229 aaPredicted RBP20.37■□□□□ 0.85
SKA3-205ENST00000465471 CRTC1Q6UUV9 634 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 SPATS2Q86XZ4 545 aaKnown RBP20.37■□□□□ 0.85
SKA3-205ENST00000465471 FAM71DQ8N9W8 422 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 OR13H1Q8NG92 308 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 OR2I1PQ8NGU4 316 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 CCDC110Q8TBZ0 833 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 MAIP1Q8WWC4 291 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 C1orf54Q8WWF1 131 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 PBKQ96KB5 322 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 MRGPRX2Q96LB1 330 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 TMEM121Q9BTD3 319 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 MBNL1Q9NR56 388 aaKnown RBP20.37■□□□□ 0.85
SKA3-205ENST00000465471 UBP1Q9NZI7 540 aa20.37■□□□□ 0.85
SKA3-205ENST00000465471 A8MX80 341 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 FPGTO14772 594 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 MAGEC1O60732 1142 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 PMPCBO75439 489 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 GCATO75600 419 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 RECQL5O94762 991 aaPredicted RBP20.36■□□□□ 0.85
SKA3-205ENST00000465471 NDST3O95803 873 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 CER1O95813 267 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 EPOP01588 193 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 ZNF30P17039 623 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 WNT3AP56704 352 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 C21orf59P57076 290 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 GALNT3Q14435 633 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 LRRC14Q15048 493 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 IRF4Q15306 451 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 PCSK7Q16549 785 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 CCNG2Q16589 344 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 HLA-BQ31612 363 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 LRRC66Q68CR7 880 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 SLC22A18ASQ8N1D0 253 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 KLHDC7BQ96G42 594 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 MLPHQ9BV36 600 aaPredicted RBP20.36■□□□□ 0.85
SKA3-205ENST00000465471 GTPBP2Q9BX10 602 aaKnown RBP20.36■□□□□ 0.85
SKA3-205ENST00000465471 ERVMER34-1Q9H9K5 563 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 SNX12Q9UMY4 172 aa20.36■□□□□ 0.85
SKA3-205ENST00000465471 ASCC3Q8N3C0 2202 aaKnown RBP20.35■□□□□ 0.85
SKA3-205ENST00000465471 C4orf47A7E2U8 309 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 CES2O00748 559 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 SLC30A4O14863 429 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 LZTS3O60299 673 aaPredicted RBP20.35■□□□□ 0.85
SKA3-205ENST00000465471 ITGAVP06756 1048 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 ATXN1LP0C7T5 689 aaKnown RBP20.35■□□□□ 0.85
SKA3-205ENST00000465471 ZNF883P0CG24 379 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 THEGLP0DJG4 465 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 PSMB4P28070 264 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 HSD11B1LQ7Z5J1 315 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 TECPR1Q7Z6L1 1165 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 RAVER1Q8IY67 606 aaKnown RBP20.35■□□□□ 0.85
SKA3-205ENST00000465471 DTD2Q96FN9 168 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 WDR24Q96S15 920 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 OSBPL9Q96SU4 736 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 GAREM1Q9H706 876 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 IL21RQ9HBE5 538 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 GDF3Q9NR23 364 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 FNDC3AQ9Y2H6 1198 aaKnown RBP20.35■□□□□ 0.85
SKA3-205ENST00000465471 SPTBN4Q9H254 2564 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 DCHS1Q96JQ0 3298 aa20.35■□□□□ 0.85
SKA3-205ENST00000465471 A0A0U1RQS6 177 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 F5H423 210 aaPredicted RBP20.34■□□□□ 0.85
SKA3-205ENST00000465471 TOR1BO14657 336 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 TM4SF5O14894 197 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms