RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 KLC3Q6P597 504 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 C16orf89Q6UX73 402 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 LRRC8DQ7L1W4 858 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 CEP70Q8NHQ1 597 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 GDPD5Q8WTR4 605 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 EXOC2Q96KP1 924 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 LAMA3Q16787 3333 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 RBP1P09455 135 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 HOXD9P28356 352 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 RGRP47804 291 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 AQP4P55087 323 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 BNC2Q6ZN30 1099 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 PDSS2Q86YH6 399 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 RYBPQ8N488 228 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 TMA16Q96EY4 203 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 TSPAN17Q96FV3 270 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 PPP1R12CQ9BZL4 782 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.74■□□□□ 0.593e-6■■■■□ 23.5
TSPAN4-210ENST00000464987 WDR41Q9HAD4 459 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 PCDHB7Q9Y5E2 793 aa18.74■□□□□ 0.59
TSPAN4-210ENST00000464987 MOXD2PA6NHM9 499 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 TRPC5OSA6NMA1 111 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 TBC1D4O60343 1298 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 GJB5O95377 273 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 ZDHHC11BP0C7U3 371 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 CYHR1Q6ZMK1 362 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 GALNT7Q86SF2 657 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 FAM156AQ8NDB6 213 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 CD99L2Q8TCZ2 262 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 POLR3BQ9NW08 1133 aaPredicted RBP18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 SRRDQ9UH36 339 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 PRPF19Q9UMS4 504 aaKnown RBP18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 ZFP37Q9Y6Q3 630 aaPredicted RBP18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 LRRC14BA6NHZ5 514 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 SLC38A8A6NNN8 435 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 PPP6CO00743 305 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 KIF3CO14782 793 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 SLC22A2O15244 555 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 CD3EAPO15446 510 aaKnown RBP18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 SUPT7LO94864 414 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 RPL17P18621 184 aaKnown RBP18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 CDH13P55290 713 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 RPS24P62847 133 aaKnown RBP18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 ACVR1Q04771 509 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 RING1Q06587 406 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 LHX8Q68G74 356 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 OR52E8Q6IFG1 317 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 PGAM4Q8N0Y7 254 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 SLC43A3Q8NBI5 491 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 STON2Q8WXE9 905 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 SPATA17Q96L03 361 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 MEAF6Q9HAF1 191 aa18.73■□□□□ 0.59
TSPAN4-210ENST00000464987 ATP6AP2A0A1C7CYW4 349 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 F5H5T6 163 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 ATP6AP2O75787 350 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 GLP2RO95838 553 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 ZCCHC18P0CG32 403 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 CD1DP15813 335 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 TCN1P20061 433 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 FDXRP22570 491 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 ADSLP30566 484 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 MAPKAPK2P49137 400 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 SGSHP51688 502 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 YBEYP58557 167 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 MRPS22P82650 360 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 TRIP10Q15642 601 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 ZNF678Q5SXM1 525 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 SDCCAG8Q86SQ7 713 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 SETD3Q86TU7 594 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 FEM1CQ96JP0 617 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 RNASEH1O60930 286 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 TRPA1O75762 1119 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 SIX3O95343 332 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 ART3Q13508 389 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 HERC3Q15034 1050 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 UNC50Q53HI1 259 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 RNF220Q5VTB9 566 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 FAM45BPQ6NSW5 357 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 CHSY3Q70JA7 882 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 GABPB2Q8TAK5 448 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 FAM45AQ8TCE6 357 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 CCDC126Q96EE4 140 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 EFCAB1Q9HAE3 211 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 SPO11Q9Y5K1 396 aa18.72■□□□□ 0.59
TSPAN4-210ENST00000464987 H3BMM5 538 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 FGF1P05230 155 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 GALTP07902 379 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 HLA-DPA1P20036 260 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 IMPDH1P20839 514 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 FLOT2Q14254 428 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 PCDH20Q8N6Y1 951 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 BRSK1Q8TDC3 778 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 C3orf30Q96M34 536 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 TRIB3Q96RU7 358 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 SPON2Q9BUD6 331 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 KLHL4Q9C0H6 718 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 YIPF3Q9GZM5 350 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 FBRSL1Q9HCM7 1045 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 TRPC7Q9HCX4 862 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 CCDC167Q9P0B6 97 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms