RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 DENND6BQ8NEG7 585 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 PIH1D2Q8WWB5 315 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 SMIM14Q96QK8 99 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 NAPGQ99747 312 aaPredicted RBP17.1■□□□□ 0.33
VPS52-215ENST00000464425 CAAP1Q9H8G2 361 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 TTC7AQ9ULT0 858 aaPredicted RBP17.1■□□□□ 0.33
VPS52-215ENST00000464425 PCDHGB2Q9Y5G2 931 aa17.1■□□□□ 0.33
VPS52-215ENST00000464425 PCNX2A6NKB5 2137 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 A0A0U1RQS6 177 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 MED19A0JLT2 244 aaPredicted RBP17.09■□□□□ 0.33
VPS52-215ENST00000464425 FZD6O60353 706 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 MMP2P08253 660 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 ALPIP09923 528 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 TCP1P17987 556 aaKnown RBP17.09■□□□□ 0.33
VPS52-215ENST00000464425 PTPN3P26045 913 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 CXCR5P32302 372 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 IGFALSP35858 605 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 RABIFP47224 123 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 BNIP3Q12983 259 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 ACOX1Q15067 660 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 IRF4Q15306 451 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 TEX44Q53QW1 395 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 ZNF542PQ5EBM4 170 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 DENND2CQ68D51 928 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 DBX2Q6ZNG2 339 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 RASGEF1CQ8N431 466 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 FAM174AQ8TBP5 190 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 RHBDD1Q8TEB9 315 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 MAIP1Q8WWC4 291 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 SPOCK2Q92563 424 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 OSBPL9Q96SU4 736 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 FAM118BQ9BPY3 351 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 TDRD1Q9BXT4 1180 aaKnown RBP17.09■□□□□ 0.33
VPS52-215ENST00000464425 C10orf88Q9H8K7 445 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 BTBD3Q9Y2F9 522 aa17.09■□□□□ 0.33
VPS52-215ENST00000464425 SPAARA0A1B0GVQ0 90 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 CFAP69A5D8W1 941 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 NPIPB15A6NHN6 443 aaPredicted RBP17.08■□□□□ 0.32
VPS52-215ENST00000464425 HACD1B0YJ81 288 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 H7C0C1 242 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 CEP104O60308 925 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 PCDHGA12O60330 932 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 SDC3O75056 442 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 RECQL5O94762 991 aaPredicted RBP17.08■□□□□ 0.32
VPS52-215ENST00000464425 PRLP01236 227 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 PCCBP05166 539 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 ITGAVP06756 1048 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 CYP2A6P11509 494 aaPredicted RBP17.08■□□□□ 0.32
VPS52-215ENST00000464425 NFKBIAP25963 317 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 VIPR1P32241 457 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 HNF1BP35680 557 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 ATP5OP48047 213 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 RXRGP48443 463 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 EPHB1P54762 984 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 PFN3P60673 137 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 SKOR1P84550 965 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 PDE1CQ14123 709 aaPredicted RBP17.08■□□□□ 0.32
VPS52-215ENST00000464425 NOMO1Q15155 1222 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 CNGA3Q16281 694 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 TPRG1LQ5T0D9 272 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 N4BP2L1Q5TBK1 243 aaPredicted RBP17.08■□□□□ 0.32
VPS52-215ENST00000464425 USP45Q70EL2 814 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 KDELC2Q7Z4H8 507 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 TSPAN33Q86UF1 283 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 NDUFAF2Q8N183 169 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 OXR1Q8N573 874 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 LPCAT1Q8NF37 534 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 ACTL9Q8TC94 416 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 SAP25Q8TEE9 199 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 SCRN2Q96FV2 425 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 RBM15Q96T37 977 aaKnown RBP eCLIP17.08■□□□□ 0.32
VPS52-215ENST00000464425 FRMD8P1Q9BZ68 369 aaPredicted RBP17.08■□□□□ 0.32
VPS52-215ENST00000464425 PCDH9Q9HC56 1237 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 PCOLCE2Q9UKZ9 415 aa17.08■□□□□ 0.32
VPS52-215ENST00000464425 TCRBV7S2A1N4TA0A589 114 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 FLRT2O43155 660 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 MTSS1O43312 755 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 ZNF189O75820 626 aaPredicted RBP17.07■□□□□ 0.32
VPS52-215ENST00000464425 HEXIM1O94992 359 aaKnown RBP17.07■□□□□ 0.32
VPS52-215ENST00000464425 FGGP02679 453 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 GM2AP17900 193 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 CA4P22748 312 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 LHCGRP22888 699 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 EPHA8P29322 1005 aaPredicted RBP17.07■□□□□ 0.32
VPS52-215ENST00000464425 SIM1P81133 766 aaPredicted RBP17.07■□□□□ 0.32
VPS52-215ENST00000464425 OTUD4Q01804 1114 aaKnown RBP17.07■□□□□ 0.32
VPS52-215ENST00000464425 WASHC5Q12768 1159 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 FZD2Q14332 565 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 INPP5AQ14642 412 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 TRIP6Q15654 476 aaKnown RBP17.07■□□□□ 0.32
VPS52-215ENST00000464425 DCP2Q8IU60 420 aaKnown RBP17.07■□□□□ 0.32
VPS52-215ENST00000464425 ACTRT1Q8TDG2 376 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 HTR3CQ8WXA8 447 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 IMP4Q96G21 291 aaKnown RBP17.07■□□□□ 0.32
VPS52-215ENST00000464425 TEKT5Q96M29 485 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 QKIQ96PU8 341 aaKnown RBP eCLIP17.07■□□□□ 0.32
VPS52-215ENST00000464425 SLC25A51Q9H1U9 297 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 GLOD4Q9HC38 313 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 GPR27Q9NS67 375 aa17.07■□□□□ 0.32
VPS52-215ENST00000464425 DNAJC28Q9NX36 388 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms