RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ZNF713Q8N859 430 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-208ENST00000464001 TMEM170AQ8WVE7 144 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 TRAPPC12Q8WVT3 735 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 HSPH1Q92598 858 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 ZSCAN31Q96LW9 406 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-208ENST00000464001 NUDT16L1Q9BRJ7 211 aaKnown RBP4.22□□□□□ -1.73
ITGB1-208ENST00000464001 UBN1Q9NPG3 1134 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 TLR8Q9NR97 1041 aaKnown RBP4.22□□□□□ -1.73
ITGB1-208ENST00000464001 HDAC6Q9UBN7 1215 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 GIMAP2Q9UG22 337 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 ACAD8Q9UKU7 415 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 hDV102S1A0JD36 115 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 TSPY2A6NKD2 308 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 IPO5O00410 1097 aaKnown RBP4.21□□□□□ -1.74
ITGB1-208ENST00000464001 HSP90AB1P08238 724 aaKnown RBP4.21□□□□□ -1.74
ITGB1-208ENST00000464001 TSPY3P0CV98 308 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 TSPY8P0CW00 308 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 HDAC4P56524 1084 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 ARL4CP56559 192 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 TSPY1Q01534 308 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 CUL4BQ13620 913 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 PRKG1Q13976 671 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 CCNG2Q16589 344 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 SETMARQ53H47 684 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-208ENST00000464001 CEP85LQ5SZL2 805 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 DENND1BQ6P3S1 775 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 TMCO3Q6UWJ1 677 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 IL20RBQ6UXL0 311 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 BRINP3Q76B58 766 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 SHFQ7M4L6 423 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 SMIM29Q86T20 159 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 PCYOX1LQ8NBM8 494 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 SH3KBP1Q96B97 665 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 RNFT2Q96EX2 444 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 TSPAN18Q96SJ8 248 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 TWSG1Q9GZX9 223 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 LMAN2LQ9H0V9 348 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 NDRG3Q9UGV2 375 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 SLCO3A1Q9UIG8 710 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 SUFUQ9UMX1 484 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 TMEM98Q9Y2Y6 226 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 DERAQ9Y315 318 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 SNX9Q9Y5X1 595 aa4.21□□□□□ -1.74
ITGB1-208ENST00000464001 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-208ENST00000464001 FAM170AA1A519 330 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 FSD2A1L4K1 749 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 CPED1A4D0V7 1026 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 HSPA12AO43301 675 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 AHCYL1O43865 530 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 XPNPEP2O43895 674 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 FAM155BO75949 473 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 WASHC5Q12768 1159 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 SLC18A3Q16572 532 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 ACCSLQ4AC99 568 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 FBXO43Q4G163 708 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 FAM205BPQ63HN1 556 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 ADAM5Q6NVV9 412 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 JMJD6Q6NYC1 403 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-208ENST00000464001 ENOSF1Q7L5Y1 443 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 CHD1LQ86WJ1 897 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 NDUFAF2Q8N183 169 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 ARRDC2Q8TBH0 407 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 THAP4Q8WY91 577 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 ATP6V1E2Q96A05 226 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 CDHR1Q96JP9 859 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 SDF4Q9BRK5 362 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 MMP28Q9H239 520 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 EBF2Q9HAK2 575 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 WASH6PQ9NQA3 447 aa4.2□□□□□ -1.74
ITGB1-208ENST00000464001 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-208ENST00000464001 TYW5A2RUC4 315 aaKnown RBP4.19□□□□□ -1.74
ITGB1-208ENST00000464001 EBAG9O00559 213 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 CLDN14O95500 239 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 IGHDP01880 384 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 AKR1B1P15121 316 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 CD72P21854 359 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 NR1H2P55055 460 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 NLRP5P59047 1200 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 PHEXP78562 749 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 TNFAIP1Q13829 316 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 RBBP5Q15291 538 aaKnown RBP4.19□□□□□ -1.74
ITGB1-208ENST00000464001 CCDC6Q16204 474 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 MEA1Q16626 185 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 CTXN3Q4LDR2 81 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 SLC10A5Q5PT55 438 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 NAPEPLDQ6IQ20 393 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 FAM122CQ6P4D5 195 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 PRSS45Q7RTY3 260 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 TRMT1LQ7Z2T5 733 aaKnown RBP4.19□□□□□ -1.74
ITGB1-208ENST00000464001 ZC3HC1Q86WB0 502 aaKnown RBP4.19□□□□□ -1.74
ITGB1-208ENST00000464001 ANKRD52Q8NB46 1076 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 GDPD5Q8WTR4 605 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 UCMAQ8WVF2 138 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 ZNF224Q9NZL3 707 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 KIF17Q9P2E2 1029 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 NFKBIL1Q9UBC1 381 aaPredicted RBP4.19□□□□□ -1.74
ITGB1-208ENST00000464001 AASSQ9UDR5 926 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 GPR34Q9UPC5 381 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 VDAC3Q9Y277 283 aa4.19□□□□□ -1.74
ITGB1-208ENST00000464001 ATXN2Q99700 1313 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms