RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 HTR3CQ8WXA8 447 aa15.9■□□□□ 0.14
ERCC3-206ENST00000462306 COQ10AQ96MF6 247 aa15.9■□□□□ 0.14
ERCC3-206ENST00000462306 RBM15Q96T37 977 aaKnown RBP eCLIP15.9■□□□□ 0.144e-6■□□□□ 11.3
ERCC3-206ENST00000462306 SLC32A1Q9H598 525 aa15.9■□□□□ 0.14
ERCC3-206ENST00000462306 GLOD4Q9HC38 313 aa15.9■□□□□ 0.14
ERCC3-206ENST00000462306 PCDH9Q9HC56 1237 aa15.9■□□□□ 0.14
ERCC3-206ENST00000462306 PCOLCE2Q9UKZ9 415 aa15.9■□□□□ 0.14
ERCC3-206ENST00000462306 BTBD3Q9Y2F9 522 aa15.9■□□□□ 0.14
ERCC3-206ENST00000462306 PPP2R2CQ9Y2T4 447 aa15.9■□□□□ 0.14
ERCC3-206ENST00000462306 A0A0J9YYE9 177 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 A0A0U1RQS6 177 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 SPTY2D1-AS1A0A0U1RR47 76 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 YKT6O15498 198 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 FLRT2O43155 660 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 TJP3O95049 919 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 TRBC1P01850 177 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 CYP2A6P11509 494 aaPredicted RBP15.89■□□□□ 0.13
ERCC3-206ENST00000462306 CA4P22748 312 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 NFKBIAP25963 317 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 EPHA8P29322 1005 aaPredicted RBP15.89■□□□□ 0.13
ERCC3-206ENST00000462306 HNF1BP35680 557 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 RPL26P61254 145 aaKnown RBP15.89■□□□□ 0.13
ERCC3-206ENST00000462306 BNIP3Q12983 259 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 KLF1Q13351 362 aaPredicted RBP15.89■□□□□ 0.13
ERCC3-206ENST00000462306 FZD2Q14332 565 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 SUZ12Q15022 739 aaKnown RBP15.89■□□□□ 0.13
ERCC3-206ENST00000462306 SLC14A2Q15849 920 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 CCDC181Q5TID7 509 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 CRTC1Q6UUV9 634 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 USP45Q70EL2 814 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 KANSL1Q7Z3B3 1105 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 TSPAN33Q86UF1 283 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 GATAD2AQ86YP4 633 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 BAHD1Q8TBE0 780 aaPredicted RBP15.89■□□□□ 0.13
ERCC3-206ENST00000462306 IFT43Q96FT9 208 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 TRIB3Q96RU7 358 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 VAT1Q99536 393 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 CAAP1Q9H8G2 361 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 C10orf88Q9H8K7 445 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 RPL26L1Q9UNX3 145 aaKnown RBP15.89■□□□□ 0.13
ERCC3-206ENST00000462306 PCNX2A6NKB5 2137 aa15.89■□□□□ 0.13
ERCC3-206ENST00000462306 MED19A0JLT2 244 aaPredicted RBP15.88■□□□□ 0.13
ERCC3-206ENST00000462306 H7C0C1 242 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 TOR1BO14657 336 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 RBL1P28749 1068 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 ATP5OP48047 213 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 EPHB1P54762 984 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 YPEL5P62699 121 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 PDE1CQ14123 709 aaPredicted RBP15.88■□□□□ 0.13
ERCC3-206ENST00000462306 INPP5AQ14642 412 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 ACOX1Q15067 660 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 QPCTQ16769 361 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 MEI1Q5TIA1 1274 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 HSD11B1LQ7Z5J1 315 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 NDUFAF2Q8N183 169 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 ZNF567Q8N184 647 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 PLA2G15Q8NCC3 412 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 LPCAT1Q8NF37 534 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 SPATA22Q8NHS9 363 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 SETD7Q8WTS6 366 aaKnown RBP15.88■□□□□ 0.13
ERCC3-206ENST00000462306 PDLIM2Q96JY6 352 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 FAM118BQ9BPY3 351 aa15.88■□□□□ 0.13
ERCC3-206ENST00000462306 TCRBV7S2A1N4TA0A589 114 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 CAPN8A6NHC0 703 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 GOLGA8CPA6NN73 597 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 ANKRD66B4E2M5 251 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 PSMD11O00231 422 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 MT-CYBP00156 380 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-206ENST00000462306 RBP3P10745 1247 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 NFKB1P19838 968 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 KCNA4P22459 653 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 GRK6P43250 576 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 EIF3EP60228 445 aaKnown RBP15.87■□□□□ 0.13
ERCC3-206ENST00000462306 PTSQ03393 145 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 MTM1Q13496 603 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 N4BP2L1Q5TBK1 243 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-206ENST00000462306 LRRC66Q68CR7 880 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 TECPR1Q7Z6L1 1165 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 PARGQ86W56 976 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 RHBDD1Q8TEB9 315 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 LYSMD1Q96S90 227 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 KCNF1Q9H3M0 494 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 KLHL8Q9P2G9 620 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-206ENST00000462306 KLF15Q9UIH9 416 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 TRHDEQ9UKU6 1024 aa15.87■□□□□ 0.13
ERCC3-206ENST00000462306 SPAARA0A1B0GVQ0 90 aa15.86■□□□□ 0.13
ERCC3-206ENST00000462306 SDC3O75056 442 aa15.86■□□□□ 0.13
ERCC3-206ENST00000462306 CSF2P04141 144 aa15.86■□□□□ 0.13
ERCC3-206ENST00000462306 PCCBP05166 539 aa15.86■□□□□ 0.13
ERCC3-206ENST00000462306 ITGAVP06756 1048 aa15.86■□□□□ 0.13
ERCC3-206ENST00000462306 NME1P15531 152 aaKnown RBP15.86■□□□□ 0.13
ERCC3-206ENST00000462306 ZNF30P17039 623 aa15.86■□□□□ 0.13
ERCC3-206ENST00000462306 TRIM23P36406 574 aa15.86■□□□□ 0.13
ERCC3-206ENST00000462306 ETV3P41162 512 aa15.86■□□□□ 0.13
ERCC3-206ENST00000462306 CDK18Q07002 472 aa15.86■□□□□ 0.13
ERCC3-206ENST00000462306 EIF2B5Q13144 721 aaKnown RBP15.86■□□□□ 0.13
ERCC3-206ENST00000462306 ARHGEF7Q14155 803 aa15.86■□□□□ 0.13
ERCC3-206ENST00000462306 RPS6KA1Q15418 735 aa15.86■□□□□ 0.13
ERCC3-206ENST00000462306 TRIP6Q15654 476 aaKnown RBP15.86■□□□□ 0.13
ERCC3-206ENST00000462306 CDKN3Q16667 212 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms