RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 ELFN1P0C7U0 828 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 PIRTP0C851 137 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 CYP2A6P11509 494 aaPredicted RBP14.04□□□□□ -0.16
HDLBP-229ENST00000460826 RPL22P35268 128 aaKnown RBP14.04□□□□□ -0.16
HDLBP-229ENST00000460826 COILP38432 576 aaPredicted RBP14.04□□□□□ -0.16
HDLBP-229ENST00000460826 PLA2G5P39877 138 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 BNC1Q01954 994 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 MPP3Q13368 585 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 SPARCL1Q14515 664 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 SF3A2Q15428 464 aaKnown RBP14.04□□□□□ -0.16
HDLBP-229ENST00000460826 PARP6Q2NL67 630 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 NAPEPLDQ6IQ20 393 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 USP45Q70EL2 814 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 MAGOHBQ96A72 148 aaKnown RBP14.04□□□□□ -0.16
HDLBP-229ENST00000460826 RMDN1Q96DB5 314 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 FAM122AQ96E09 287 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 IFT43Q96FT9 208 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 SERAC1Q96JX3 654 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 KLF6Q99612 283 aaPredicted RBP14.04□□□□□ -0.16
HDLBP-229ENST00000460826 HINFPQ9BQA5 517 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 FICDQ9BVA6 458 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 HOMER3Q9NSC5 361 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 SEMA4GQ9NTN9 838 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 TPX2Q9ULW0 747 aaKnown RBP14.04□□□□□ -0.16
HDLBP-229ENST00000460826 DMTF1Q9Y222 760 aa14.04□□□□□ -0.16
HDLBP-229ENST00000460826 A0A1B0GTW7 788 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 H0Y8X5 98 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 PHF2O75151 1096 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 TM7SF2O76062 418 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 CFIP05156 583 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 C1SP09871 688 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 ZNF806P0C7X5 589 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 HNRNPA2B1P22626 353 aaKnown RBP14.03□□□□□ -0.16
HDLBP-229ENST00000460826 ADRA1AP35348 466 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 HOXD12P35452 270 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 GRIA4P48058 902 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 CSNK1EP49674 416 aaKnown RBP14.03□□□□□ -0.16
HDLBP-229ENST00000460826 CLDN2P57739 230 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 SGCGQ13326 291 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 CDKN3Q16667 212 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 DUOXA1Q1HG43 343 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 TRIM61Q5EBN2 209 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 SIRPB2Q5JXA9 342 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 LRRC66Q68CR7 880 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 DENND2CQ68D51 928 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 KCTD11Q693B1 232 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 GCNT7Q6ZNI0 430 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 RFLNAQ6ZTI6 216 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 HSD11B1LQ7Z5J1 315 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 CBARPQ8N350 705 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-229ENST00000460826 SLC25A41Q8N5S1 370 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 TP53I13Q8NBR0 393 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-229ENST00000460826 TMEM145Q8NBT3 493 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 ASB12Q8WXK4 309 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 COQ10AQ96MF6 247 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 LYSMD1Q96S90 227 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 APOL2Q9BQE5 337 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 ADGRE3Q9BY15 652 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 CAPN10Q9HC96 672 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 MBNL1Q9NR56 388 aaKnown RBP14.03□□□□□ -0.16
HDLBP-229ENST00000460826 AASDHPPTQ9NRN7 309 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 SUSD2Q9UGT4 822 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 SPO11Q9Y5K1 396 aa14.03□□□□□ -0.16
HDLBP-229ENST00000460826 ASCC3Q8N3C0 2202 aaKnown RBP14.03□□□□□ -0.16
HDLBP-229ENST00000460826 A0A1B0GVT2 93 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 PRAMEF26H0Y7S4 382 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 LZTS3O60299 673 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-229ENST00000460826 USP12O75317 370 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 RECQL5O94762 991 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-229ENST00000460826 CLDN7O95471 211 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 GNSP15586 552 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 IGFALSP35858 605 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 NUDT1P36639 197 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 DPP6P42658 865 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 RACK1P63244 317 aaKnown RBP14.02□□□□□ -0.17
HDLBP-229ENST00000460826 IRX4P78413 519 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 PTSQ03393 145 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 PRPSAP1Q14558 356 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 TRIP13Q15645 432 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-229ENST00000460826 SLC1A5Q15758 541 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 WSCD2Q2TBF2 565 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 SLC23A3Q6PIS1 610 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 CCDC137Q6PK04 289 aaKnown RBP14.02□□□□□ -0.17
HDLBP-229ENST00000460826 GSTA5Q7RTV2 222 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 LYSMD3Q7Z3D4 306 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 ZSCAN30Q86W11 494 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 NDUFAF2Q8N183 169 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 PELI3Q8N2H9 469 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 PDCD7Q8N8D1 485 aaKnown RBP14.02□□□□□ -0.17
HDLBP-229ENST00000460826 CCDC89Q8N998 374 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 ATL2Q8NHH9 583 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 CENPTQ96BT3 561 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 TBL1YQ9BQ87 522 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 FSD1LQ9BXM9 530 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 DDX47Q9H0S4 455 aaKnown RBP14.02□□□□□ -0.17
HDLBP-229ENST00000460826 ETNK1Q9HBU6 452 aa14.02□□□□□ -0.17
HDLBP-229ENST00000460826 AAR2Q9Y312 384 aaKnown RBP14.02□□□□□ -0.17
HDLBP-229ENST00000460826 GOLGA6L10A0A0M3HER8 536 aa14.01□□□□□ -0.17
HDLBP-229ENST00000460826 C1orf232A0A0U1RR37 186 aa14.01□□□□□ -0.17
HDLBP-229ENST00000460826 POM121BA6NF01 834 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms