RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 A0A1B0GTW7 788 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 LRP3O75074 770 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 GCATO75600 419 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 NDST3O95803 873 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 ZSCAN5DPP0CG00 497 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 CYP2A6P11509 494 aaPredicted RBP12.86□□□□□ -0.35
COL18A1-206ENST00000459895 AFF3P51826 1226 aaKnown RBP12.86□□□□□ -0.35
COL18A1-206ENST00000459895 GEMP55040 296 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 CLDN2P57739 230 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 POLR2LP62875 67 aaKnown RBP12.86□□□□□ -0.35
COL18A1-206ENST00000459895 BNC1Q01954 994 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 GRIK2Q13002 908 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 SIRPB2Q5JXA9 342 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 DENND2CQ68D51 928 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 PRR23CQ6ZRP0 262 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 LYSMD3Q7Z3D4 306 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 HSD11B1LQ7Z5J1 315 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 ZSCAN30Q86W11 494 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 CREG2Q8IUH2 290 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 CCDC89Q8N998 374 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 TP53I13Q8NBR0 393 aaPredicted RBP12.86□□□□□ -0.35
COL18A1-206ENST00000459895 DENND6BQ8NEG7 585 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 RMDN1Q96DB5 314 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 SCRN2Q96FV2 425 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 NAP1L3Q99457 506 aaPredicted RBP12.86□□□□□ -0.35
COL18A1-206ENST00000459895 KLF6Q99612 283 aaPredicted RBP12.86□□□□□ -0.35
COL18A1-206ENST00000459895 APOL2Q9BQE5 337 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 ADGRE3Q9BY15 652 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 SLC17A9Q9BYT1 436 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 RXFP3Q9NSD7 469 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 PPIL1Q9Y3C6 166 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 ZNF711Q9Y462 761 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 SAR1BQ9Y6B6 198 aa12.86□□□□□ -0.35
COL18A1-206ENST00000459895 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.86□□□□□ -0.35
COL18A1-206ENST00000459895 ZFHX2Q9C0A1 2572 aaPredicted RBP12.85□□□□□ -0.35
COL18A1-206ENST00000459895 GOLGA6L10A0A0M3HER8 536 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 C1orf232A0A0U1RR37 186 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 A0A1B0GVT2 93 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 A0A1W2PR77 199 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 PRAMEF26H0Y7S4 382 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 PDE2AO00408 941 aaPredicted RBP12.85□□□□□ -0.35
COL18A1-206ENST00000459895 USP12O75317 370 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 ANXA9O76027 345 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 TM7SF2O76062 418 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 PCCBP05166 539 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 GNSP15586 552 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 AKT2P31751 481 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 ADRA1AP35348 466 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 NUDT1P36639 197 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 RACK1P63244 317 aaKnown RBP12.85□□□□□ -0.35
COL18A1-206ENST00000459895 SLC1A5Q15758 541 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 CSRP2Q16527 193 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 DUOXA1Q1HG43 343 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 SLC23A3Q6PIS1 610 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 CRTC1Q6UUV9 634 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 KYAT3Q6YP21 454 aaKnown RBP12.85□□□□□ -0.35
COL18A1-206ENST00000459895 PTAR1Q7Z6K3 402 aaPredicted RBP12.85□□□□□ -0.35
COL18A1-206ENST00000459895 RABEPKQ7Z6M1 372 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 SLC25A41Q8N5S1 370 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 NUS1Q96E22 293 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 DTD2Q96FN9 168 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 COQ10AQ96MF6 247 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 LYSMD1Q96S90 227 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 EDEM2Q9BV94 578 aa12.85□□□□□ -0.35
COL18A1-206ENST00000459895 MBNL1Q9NR56 388 aaKnown RBP12.85□□□□□ -0.35
COL18A1-206ENST00000459895 CACNA1EQ15878 2313 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 PLXNB3Q9ULL4 1909 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 LOC285095A0A1B0GVY8 99 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 A6NNZ2 444 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 ANKRD66B4E2M5 251 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 LZTS3O60299 673 aaPredicted RBP12.84□□□□□ -0.35
COL18A1-206ENST00000459895 RECQL5O94762 991 aaPredicted RBP12.84□□□□□ -0.35
COL18A1-206ENST00000459895 AP2A1O95782 977 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 PAK4O96013 591 aaPredicted RBP12.84□□□□□ -0.35
COL18A1-206ENST00000459895 AGTP01019 485 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 FGF1P05230 155 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 ZNF806P0C7X5 589 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 HLA-DPA1P20036 260 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 NFKBIAP25963 317 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 CD38P28907 300 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 CASQ1P31415 396 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 RPL22P35268 128 aaKnown RBP12.84□□□□□ -0.35
COL18A1-206ENST00000459895 ETV3P41162 512 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 FNTAP49354 379 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 CSNK1EP49674 416 aaKnown RBP12.84□□□□□ -0.35
COL18A1-206ENST00000459895 STC1P52823 247 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 ARHGEF7Q14155 803 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 SPARCL1Q14515 664 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 PRPSAP1Q14558 356 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 ACOX1Q15067 660 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 CDKN3Q16667 212 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 TPRG1LQ5T0D9 272 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 KCTD11Q693B1 232 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 CCDC137Q6PK04 289 aaKnown RBP12.84□□□□□ -0.35
COL18A1-206ENST00000459895 RFLNAQ6ZTI6 216 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 GSTA5Q7RTV2 222 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 ABI3BPQ7Z7G0 1075 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 SLC22A18ASQ8N1D0 253 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 PELI3Q8N2H9 469 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms