RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 C19orf43Q9BQ61 176 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SEZ6LQ9BYH1 1024 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 MAGEH1Q9H213 219 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 CATSPERZQ9NTU4 200 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 TMLHEQ9NVH6 421 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 CACNA2D2Q9NY47 1150 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 ABI2Q9NYB9 513 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 PTTG2Q9NZH5 202 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SEPT3Q9UH03 358 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 AP4S1Q9Y587 144 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SCN10AQ9Y5Y9 1956 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 AQP12BA6NM10 295 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 STX16-NPEPL1H3BU86 382 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 STX16O14662 325 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 GIPC1O14908 333 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 CLGNO14967 610 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 ANGPT2O15123 496 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 TRIM24O15164 1050 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 CFLARO15519 480 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 MSI1O43347 362 aaKnown RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 PRAMEF11O60813 436 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 RNASEH1O60930 286 aaKnown RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 KERAO60938 352 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 ZMPSTE24O75844 475 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 NDST3O95803 873 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 S1PR4O95977 384 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 CLPTM1O96005 669 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 NPPAP01160 153 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 ZCCHC18P0CG32 403 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 HOXB6P17509 224 aaKnown RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 PSMC3P17980 439 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 PMLP29590 882 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 GSTT1P30711 240 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 HUNKP57058 714 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 RAD51Q06609 339 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 DLG1Q12959 904 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 ITGA7Q13683 1181 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 CEACAM7Q14002 265 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 LRP8Q14114 963 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 LRRC36Q1X8D7 754 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 TYSND1Q2T9J0 566 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 AASDHQ4L235 1098 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 SLC39A12Q504Y0 691 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 AGKQ53H12 422 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 SIRPB2Q5JXA9 342 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 PPM1LQ5SGD2 360 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF678Q5SXM1 525 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 PIK3R6Q5UE93 754 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 RNF220Q5VTB9 566 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 CD300LGQ6UXG3 332 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 LRRTM3Q86VH5 581 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF354CQ86Y25 554 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 IFNL1Q8IU54 200 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 MFSD6LQ8IWD5 586 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 AQP12AQ8IXF9 295 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 MIER2Q8N344 545 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 NKAPQ8N5F7 415 aaKnown RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 HIPK4Q8NE63 616 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 PDZD8Q8NEN9 1154 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 SPDYE1Q8NFV5 336 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 OR13J1Q8NGT2 312 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 STAG3L4Q8TBR4 150 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 OVCA2Q8WZ82 227 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 USP13Q92995 863 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 FBXO32Q969P5 355 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 GFM2Q969S9 779 aaKnown RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 EME1Q96AY2 570 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 PABPC5Q96DU9 382 aaKnown RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 TMA16Q96EY4 203 aaKnown RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 DDX50Q9BQ39 737 aaKnown RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 PAAF1Q9BRP4 392 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 TRIM54Q9BYV2 358 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 DERL2Q9GZP9 239 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 GSTO2Q9H4Y5 243 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 ELAC1Q9H777 363 aaKnown RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 SLC24A3Q9HC58 644 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 ARMC1Q9NVT9 282 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 TAS2R13Q9NYV9 303 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 MARCH2Q9P0N8 246 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 UXTQ9UBK9 157 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-202ENST00000459727 SLC2A6Q9UGQ3 507 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 SFMBT1Q9UHJ3 866 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 DMTF1Q9Y222 760 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 PCDHGA7Q9Y5G6 932 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 AP4B1Q9Y6B7 739 aa8.86□□□□□ -0.99
HDAC3-202ENST00000459727 PLXNA3P51805 1871 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 TCRBV3S1A0A5B6 114 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 CCDC78A2IDD5 438 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 LCHNA4D1U4 455 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 CAPN8A6NHC0 703 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 C2orf81A6NN90 581 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 F5H5T6 163 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 CD3EAPO15446 510 aaKnown RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 HOXA2O43364 376 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 HNRNPRO43390 633 aaKnown RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 ADAMTS4O75173 837 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 CRCPO75575 148 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 SOAT2O75908 522 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 SUPT7LO94864 414 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms