RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 QKIQ96PU8 341 aaKnown RBP eCLIP16.2■□□□□ 0.18
CD28-203ENST00000458610 LZTFL1Q9NQ48 299 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 KLHL8Q9P2G9 620 aaPredicted RBP16.2■□□□□ 0.18
CD28-203ENST00000458610 PCOLCE2Q9UKZ9 415 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 CHKBQ9Y259 395 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 CAPN6Q9Y6Q1 641 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 A0A0J9YYE9 177 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 A0A0U1RQJ8 604 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 NEMP2A6NFY4 417 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 A8MX80 341 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 TRBC1P01850 177 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 PDHA1P08559 390 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 KELP23276 732 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 EPHA8P29322 1005 aaPredicted RBP16.19■□□□□ 0.18
CD28-203ENST00000458610 HNF1BP35680 557 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 IGFALSP35858 605 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 BLKP51451 505 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 EIF3EP60228 445 aaKnown RBP16.19■□□□□ 0.18
CD28-203ENST00000458610 SEMG2Q02383 582 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 IRF4Q15306 451 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 RPS6KA1Q15418 735 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 SEL1L2Q5TEA6 688 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 ITPRIPL1Q6GPH6 555 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 DARS2Q6PI48 645 aaKnown RBP16.19■□□□□ 0.18
CD28-203ENST00000458610 LPCAT1Q8NF37 534 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 TRIM58Q8NG06 486 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 MLPHQ9BV36 600 aaPredicted RBP16.19■□□□□ 0.18
CD28-203ENST00000458610 MBNL1Q9NR56 388 aaKnown RBP16.19■□□□□ 0.18
CD28-203ENST00000458610 GPR27Q9NS67 375 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 DNAJC28Q9NX36 388 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 COQ6Q9Y2Z9 468 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 ADAMTS9Q9P2N4 1935 aa16.19■□□□□ 0.18
CD28-203ENST00000458610 PLXNA2O75051 1894 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 ANKRD66B4E2M5 251 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 CACNB4O00305 520 aaPredicted RBP16.18■□□□□ 0.18
CD28-203ENST00000458610 DDX3YO15523 660 aaKnown RBP16.18■□□□□ 0.18
CD28-203ENST00000458610 PYGLP06737 847 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 RBP3P10745 1247 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 CTPS1P17812 591 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 SIM1P81133 766 aaPredicted RBP16.18■□□□□ 0.18
CD28-203ENST00000458610 IL9RQ01113 521 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 OTUD4Q01804 1114 aaKnown RBP16.18■□□□□ 0.18
CD28-203ENST00000458610 CDK18Q07002 472 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 WASHC5Q12768 1159 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 FZD2Q14332 565 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 INPP5AQ14642 412 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 SHBQ15464 509 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 CNGA3Q16281 694 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 GLRX5Q86SX6 157 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 CBARPQ8N350 705 aaPredicted RBP16.18■□□□□ 0.18
CD28-203ENST00000458610 CCHCR1Q8TD31 782 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 COQ10AQ96MF6 247 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 PPP1R2P1Q96PQ5 205 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 LYSMD1Q96S90 227 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 RBM15Q96T37 977 aaKnown RBP eCLIP16.18■□□□□ 0.18
CD28-203ENST00000458610 APOOQ9BUR5 198 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 CEP41Q9BYV8 373 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 FAM153AQ9UHL3 310 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 PACSIN2Q9UNF0 486 aaPredicted RBP16.18■□□□□ 0.18
CD28-203ENST00000458610 APOBEC2Q9Y235 224 aaKnown RBP16.18■□□□□ 0.18
CD28-203ENST00000458610 PPP2R2CQ9Y2T4 447 aa16.18■□□□□ 0.18
CD28-203ENST00000458610 SHROOM3Q8TF72 1996 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 CAPN8A6NHC0 703 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 NPIPB15A6NHN6 443 aaPredicted RBP16.17■□□□□ 0.18
CD28-203ENST00000458610 ZSCAN12O43309 604 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 CBFA2T3O75081 653 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 TRIM16O95361 564 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 PRLP01236 227 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 EPOP01588 193 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 CSF2P04141 144 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 PCCBP05166 539 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 MMP2P08253 660 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 HOXC4P09017 264 aaPredicted RBP16.17■□□□□ 0.18
CD28-203ENST00000458610 ALPPL2P10696 532 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 BNIP3Q12983 259 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 ZNF211Q13398 564 aaPredicted RBP16.17■□□□□ 0.18
CD28-203ENST00000458610 PRPSAP1Q14558 356 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 N4BP2L1Q5TBK1 243 aaPredicted RBP16.17■□□□□ 0.18
CD28-203ENST00000458610 DENND2CQ68D51 928 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 CRTC1Q6UUV9 634 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 MACC1Q6ZN28 852 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 B4GALNT4Q76KP1 1039 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 NLRP8Q86W28 1048 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 GATAD2AQ86YP4 633 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 NRSN1Q8IZ57 195 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 SLC22A18ASQ8N1D0 253 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 LRRC45Q96CN5 670 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 NUS1Q96E22 293 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 CAMK1GQ96NX5 476 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 FCRL5Q96RD9 977 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 CSNK1G3Q9Y6M4 447 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 DMDP11532 3685 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 SPTBN4Q9H254 2564 aa16.17■□□□□ 0.18
CD28-203ENST00000458610 KNL1Q8NG31 2342 aa16.16■□□□□ 0.18
CD28-203ENST00000458610 RGSL1A5PLK6 1076 aa16.16■□□□□ 0.18
CD28-203ENST00000458610 GIPC1O14908 333 aa16.16■□□□□ 0.18
CD28-203ENST00000458610 TNFSF14O43557 240 aa16.16■□□□□ 0.18
CD28-203ENST00000458610 ANXA9O76027 345 aa16.16■□□□□ 0.18
CD28-203ENST00000458610 ADRB1P08588 477 aa16.16■□□□□ 0.18
CD28-203ENST00000458610 ALPIP09923 528 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms