RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 MAGEB16A2A368 324 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 MROH6A6NGR9 719 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 AURKAO14965 403 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 LDB2O43679 373 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 APBB3O95704 486 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 IGLV3-19P01714 112 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 VIPR1P32241 457 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 ELK3P41970 407 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 CXCL12P48061 93 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 RALGDSQ12967 914 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 LAMB3Q13751 1172 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 SLMAPQ14BN4 828 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 BRD3Q15059 726 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 TAF1AQ15573 450 aaPredicted RBP16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 CCDC38Q502W7 563 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 ANO7Q6IWH7 933 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 CRTC1Q6UUV9 634 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 GLT6D1Q7Z4J2 308 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 BMP8AQ7Z5Y6 402 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 CCNJLQ8IV13 435 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 IGDCC3Q8IVU1 814 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 ZBED8Q8IZ13 594 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 CAMKK1Q8N5S9 505 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 PPHLN1Q8NEY8 458 aaKnown RBP16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 STAMBPL1Q96FJ0 436 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 OMDQ99983 421 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 C19orf43Q9BQ61 176 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 RIMKLBQ9ULI2 386 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 FADS3Q9Y5Q0 445 aa16.63■□□□□ 0.25
CCDC90B-202ENST00000455220 FAM237BA0A1B0GVD1 139 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 CCDC151A5D8V7 595 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 RNASEH2AO75792 299 aaKnown RBP16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 CRTAMO95727 393 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 ACADMP11310 421 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 ZNF30P17039 623 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 PSMA3P25788 255 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 MAGEA4P43358 317 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 TAS2R38P59533 333 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 FAM193AP78312 1265 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 TMEM52BQ4KMG9 183 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 DENND2CQ68D51 928 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 NLRP9Q7RTR0 991 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 LYSMD3Q7Z3D4 306 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 TMC3Q7Z5M5 1100 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 TMEM135Q86UB9 458 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 TSPAN33Q86UF1 283 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 FBXO36Q8NEA4 188 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 PEX13Q92968 403 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 CAVIN3Q969G5 261 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 EID2BQ96D98 161 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 ITM2CQ9NQX7 267 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 CHRAC1Q9NRG0 131 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 SAMD15Q9P1V8 674 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 EBF1Q9UH73 591 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 CHMP2BQ9UQN3 213 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 ITM2BQ9Y287 266 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 ARL5AQ9Y689 179 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 MAD1L1Q9Y6D9 718 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 CACNA1IQ9P0X4 2223 aa16.62■□□□□ 0.25
CCDC90B-202ENST00000455220 SCN8AQ9UQD0 1980 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 UQCRHLA0A096LP55 91 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 C1orf232A0A0U1RR37 186 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 H0Y858 1186 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 K7ESF4 209 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 PLRG1O43660 514 aaKnown RBP16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 UQCRHP07919 91 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 PGAM1P18669 254 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 HMGCLP35914 325 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 TPMTP51580 245 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 ZNF140P52738 457 aaPredicted RBP16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 PDE1BQ01064 536 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 SEPT6Q14141 434 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 CNGA3Q16281 694 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 HP1BP3Q5SSJ5 553 aaPredicted RBP16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 LRRC66Q68CR7 880 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 CASC4Q6P4E1 433 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 ANKMY2Q8IV38 441 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 CBARPQ8N350 705 aaPredicted RBP16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 PYROXD1Q8WU10 500 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 ZFYVE1Q9HBF4 777 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 PLAC1Q9HBJ0 212 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 TREX1Q9NSU2 369 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 IL17CQ9P0M4 197 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 BCCIPQ9P287 314 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 GGT7Q9UJ14 662 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 NCKAP1Q9Y2A7 1128 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 NUMA1Q14980 2115 aa16.61■□□□□ 0.25
CCDC90B-202ENST00000455220 A0A0U1RQS6 177 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 C2orf81A6NN90 581 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 PSMD11O00231 422 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 TSPAN6O43657 245 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 USP1O94782 785 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 CLDN7O95471 211 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 HOXA6P31267 233 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 ADPRHP54922 357 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 SEMG2Q02383 582 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 PTSQ03393 145 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 ACVR1Q04771 509 aa16.6■□□□□ 0.25
CCDC90B-202ENST00000455220 MAP9Q49MG5 647 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms