RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 NVLO15381 856 aaKnown RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SUV39H1O43463 412 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PPFIA2O75334 1257 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ECEL1O95672 775 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FUCA1P04066 466 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CYP1A1P04798 512 aaPredicted RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GPD1P21695 349 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LHCGRP22888 699 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ETV3P41162 512 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MLLT3P42568 568 aaPredicted RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PTPN9P43378 593 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 POLD2P49005 469 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 BLKP51451 505 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SNX16P57768 344 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KIAA1024LP59773 190 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TPI1P60174 286 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 POLR2FP61218 127 aaKnown RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RPL7AP62424 266 aaKnown RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CDR2Q01850 454 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NRG1Q02297 640 aaPredicted RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZFP36L1Q07352 338 aaKnown RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SLC20A2Q08357 652 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ELP6Q0PNE2 266 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 EIF3IQ13347 325 aaKnown RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MTM1Q13496 603 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ARHGEF7Q14155 803 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ACOX1Q15067 660 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CNGA3Q16281 694 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TMEM52BQ4KMG9 183 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SNAP47Q5SQN1 464 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FAM182AQ5T1J6 154 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ERAP2Q6P179 960 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DNAJC24Q6P3W2 148 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF574Q6ZN55 896 aaPredicted RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MARK2Q7KZI7 788 aaKnown RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MON1BQ7L1V2 547 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TSPAN33Q86UF1 283 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DTX1Q86Y01 620 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NRROSQ86YC3 692 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MSANTD4Q8NCY6 345 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 WDR48Q8TAF3 677 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PDCD6IPQ8WUM4 868 aaKnown RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SCG3Q8WXD2 468 aaKnown RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ASB12Q8WXK4 309 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NUS1Q96E22 293 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FAM81BQ96LP2 452 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TBATAQ96M53 351 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CMKLR1Q99788 373 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TAS2R14Q9NYV8 317 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TAAR2Q9P1P5 351 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DKK3Q9UBP4 350 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 B4GALT6Q9UBX8 382 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CD84Q9UIB8 345 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ACSL6Q9UKU0 697 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PLAAQ9Y263 795 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PRKAB1Q9Y478 270 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PCYT1BQ9Y5K3 369 aaPredicted RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 B3GALT1Q9Y5Z6 326 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PRRC2CQ9Y520 2896 aaKnown RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF106Q9H2Y7 1883 aaKnown RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TRBV23OR9-2A0A075B6M9 112 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZSCAN5CA6NGD5 496 aaPredicted RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NPIPB15A6NHN6 443 aaPredicted RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 EFCAB7A8K855 629 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RHPN2P1A8MT19 583 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 A8MU76 341 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TMCO5BA8MYB1 307 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 STMND1H3BQB6 276 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 B4GAT1O43505 415 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PRAMEF11O60813 436 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 EML2O95834 649 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TNFP01375 233 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ITGB2P05107 769 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FGF3P11487 239 aaPredicted RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KRT3P12035 628 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TCF4P15884 667 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GLB1P16278 677 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CTPS1P17812 591 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SERPINA4P29622 427 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 OAS2P29728 719 aaKnown RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 UGT1A3P35503 534 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SOX5P35711 763 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MAPK9P45984 424 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NSFP46459 744 aaKnown RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PAPOLAP51003 745 aaKnown RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 JAM2P57087 298 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 BPIFB4P59827 614 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MAXP61244 160 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 B4GALNT1Q00973 533 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RAD51Q06609 339 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KCNAB2Q13303 367 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 BIRC2Q13490 618 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CLEC16AQ2KHT3 1053 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PARP15Q460N3 678 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ANKS6Q68DC2 871 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 BRAT1Q6PJG6 821 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 WDR59Q6PJI9 974 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LIPIQ6XZB0 460 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 STRADAQ7RTN6 431 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms