RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SPRED1Q7Z699 444 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 MICU3Q86XE3 530 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 ARL10Q8N8L6 244 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 Q8N9G6 341 aaPredicted RBP5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 KYQ8NBH2 561 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 CXorf38Q8TB03 319 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 DIO2Q92813 273 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 GTF3C6Q969F1 213 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 MYLPFQ96A32 169 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 C1orf159Q96HA4 380 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 TBATAQ96M53 351 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 MYOCQ99972 504 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 NTPCRQ9BSD7 190 aaKnown RBP5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 LGR4Q9BXB1 951 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 LIME1Q9H400 295 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 FZD3Q9NPG1 666 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 PRDM7Q9NQW5 492 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 RBM28Q9NW13 759 aaKnown RBP5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 OSER1Q9NX31 292 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 OCIAD1Q9NX40 245 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 SLC39A1Q9NY26 324 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 DDX19BQ9UMR2 479 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 DERAQ9Y315 318 aa5.37□□□□□ -1.55
SBDSP1-204ENST00000453858 FAM171A2A8MVW0 826 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 MASP2O00187 686 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 AQP7O14520 342 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 SLC7A4O43246 635 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 PROM1O43490 865 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 TLR5O60602 858 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 RNASEH1O60930 286 aaKnown RBP5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 STC2O76061 302 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 PNLIPP16233 465 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 TSHRP16473 764 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 JUNBP17275 347 aaPredicted RBP5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 IGFBP2P18065 325 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 HSD3B2P26439 372 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 HOXD9P28356 352 aaPredicted RBP5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 CCL11P51671 97 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 THOP1P52888 689 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 FOLH1Q04609 750 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 CEBPEQ15744 281 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 CHRNA6Q15825 494 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 DCAF12Q5T6F0 453 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 AGBL4Q5VU57 503 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 MBLAC2Q68D91 279 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 ESRP1Q6NXG1 681 aaKnown RBP5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 XKRXQ6PP77 449 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 APOA5Q6Q788 366 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 ZPBP2Q6X784 338 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 C4orf50Q6ZRC1 276 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 CHST9Q7L1S5 443 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 PARGQ86W56 976 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 RHOT1Q8IXI2 618 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 FAM217AQ8IXS0 508 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 PPIL6Q8IXY8 311 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 RBFAQ8N0V3 343 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 DAW1Q8N136 415 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 NUP93Q8N1F7 819 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 TMEM86AQ8N2M4 240 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 GPR156Q8NFN8 814 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 FDCSPQ8NFU4 85 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 ABHD4Q8TB40 342 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 KLK6Q92876 244 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 TTC17Q96AE7 1141 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 PCED1BQ96HM7 432 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 SMAD5Q99717 465 aaKnown RBP5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 LRRC61Q9BV99 259 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 NUDT9Q9BW91 350 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 PLA2G12AQ9BZM1 189 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 C19orf73Q9NVV2 129 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 GDAP2Q9NXN4 497 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 DPP3Q9NY33 737 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 GULP1Q9UBP9 304 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 ADGRE2Q9UHX3 823 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 SARDHQ9UL12 918 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 B3GNT3Q9Y2A9 372 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 PCDHGA6Q9Y5G7 932 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 RPS6KL1Q9Y6S9 549 aa5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 CHD3Q12873 2000 aaKnown RBP5.36□□□□□ -1.55
SBDSP1-204ENST00000453858 A0A0U1RQS6 177 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 CLDN3O15551 220 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 CDC45O75419 566 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 CREG1O75629 220 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 AGAP20933 346 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 HNRNPA2B1P22626 353 aaKnown RBP5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 CDC25AP30304 524 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 CHKAP35790 457 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 ARL4AP40617 200 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 PSMD8P48556 350 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 LHX1P48742 406 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 CHAF1BQ13112 559 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 SQSTM1Q13501 440 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 SF1Q15637 639 aaKnown RBP5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 SOWAHAQ2M3V2 549 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 ANO6Q4KMQ2 910 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 FAM209AQ5JX71 171 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 CERCAMQ5T4B2 595 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 KLHDC10Q6PID8 442 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 LVRNQ6Q4G3 990 aa5.35□□□□□ -1.55
SBDSP1-204ENST00000453858 RPTNQ6XPR3 784 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms