RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 FASTKD3Q14CZ7 662 aaKnown RBP15.96■□□□□ 0.15
SNX17-204ENST00000453453 FAM182AQ5T1J6 154 aa15.96■□□□□ 0.15
SNX17-204ENST00000453453 SYCP2LQ5T4T6 812 aa15.96■□□□□ 0.15
SNX17-204ENST00000453453 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.96■□□□□ 0.15
SNX17-204ENST00000453453 PDCD7Q8N8D1 485 aaKnown RBP15.96■□□□□ 0.15
SNX17-204ENST00000453453 DRAXINQ8NBI3 349 aaPredicted RBP15.96■□□□□ 0.15
SNX17-204ENST00000453453 UCMAQ8WVF2 138 aa15.96■□□□□ 0.15
SNX17-204ENST00000453453 OXNAD1Q96HP4 312 aaPredicted RBP15.96■□□□□ 0.15
SNX17-204ENST00000453453 LMLNQ96KR4 655 aa15.96■□□□□ 0.15
SNX17-204ENST00000453453 C7orf26Q96N11 449 aa15.96■□□□□ 0.15
SNX17-204ENST00000453453 CYTH2Q99418 400 aa15.96■□□□□ 0.15
SNX17-204ENST00000453453 SIKE1Q9BRV8 207 aa15.96■□□□□ 0.15
SNX17-204ENST00000453453 CENPKQ9BS16 269 aa15.96■□□□□ 0.15
SNX17-204ENST00000453453 LRRC40Q9H9A6 602 aa15.96■□□□□ 0.15
SNX17-204ENST00000453453 KCNK13Q9HB14 408 aa15.96■□□□□ 0.15
SNX17-204ENST00000453453 XAB2Q9HCS7 855 aaKnown RBP15.96■□□□□ 0.15
SNX17-204ENST00000453453 TMEM63AO94886 807 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 AP2A1O95782 977 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 MT-ND3P03897 115 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 POLR2EP19388 210 aaKnown RBP15.95■□□□□ 0.14
SNX17-204ENST00000453453 CES1P23141 567 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 CRABP2P29373 138 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 AP2B1P63010 937 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 GRAMD4Q6IC98 578 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 LINGO4Q6UY18 593 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 LINC00523Q86TU6 105 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 MYLK4Q86YV6 388 aaPredicted RBP15.95■□□□□ 0.14
SNX17-204ENST00000453453 PIP4K2CQ8TBX8 421 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 FAM210AQ96ND0 272 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 GUCD1Q96NT3 240 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 PSKH2Q96QS6 385 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 C1orf21Q9H246 121 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 HPS4Q9NQG7 708 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 VPS45Q9NRW7 570 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 FBXO10Q9UK96 956 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 NUMBLQ9Y6R0 609 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 MIA3Q5JRA6 1907 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 KIAA1549LQ6ZVL6 1849 aa15.95■□□□□ 0.14
SNX17-204ENST00000453453 TCRBV7S3A2A0A539 114 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.94■□□□□ 0.14
SNX17-204ENST00000453453 ANHXE9PGG2 379 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 AP3B1O00203 1094 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 FCHO1O14526 889 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 TMCC1O94876 653 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 SERPINB3P29508 390 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 SERPINH1P50454 418 aaKnown RBP15.94■□□□□ 0.14
SNX17-204ENST00000453453 RHOAP61586 193 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 MPP3Q13368 585 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 ITPRIPL2Q3MIP1 535 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 FUT11Q495W5 492 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 HABP4Q5JVS0 413 aaKnown RBP15.94■□□□□ 0.14
SNX17-204ENST00000453453 ASTLQ6HA08 431 aaPredicted RBP15.94■□□□□ 0.14
SNX17-204ENST00000453453 NAPEPLDQ6IQ20 393 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 RINLQ6ZS11 566 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 CSGALNACT1Q8TDX6 532 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 IMP4Q96G21 291 aaKnown RBP15.94■□□□□ 0.14
SNX17-204ENST00000453453 MGME1Q9BQP7 344 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 FSD1LQ9BXM9 530 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 BRD9Q9H8M2 597 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 NDUFA13Q9P0J0 144 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 DEC1Q9P2X7 70 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 DCTN4Q9UJW0 460 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 INTS6Q9UL03 887 aaKnown RBP15.94■□□□□ 0.14
SNX17-204ENST00000453453 FAM50BQ9Y247 325 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 SLC27A6Q9Y2P4 619 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 A0A0G2JND7 137 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 TULP3O75386 442 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 TM7SF2O76062 418 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 ASLP04424 464 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 LYNP07948 512 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 MLNP12872 115 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 SESN3P58005 492 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 MAXP61244 160 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 CYTH1Q15438 398 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 RNF220Q5VTB9 566 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 ATG16L1Q676U5 607 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 MBLAC2Q68D91 279 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 ALG1LQ6GMV1 187 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 KIAA0907Q7Z7F0 614 aaPredicted RBP15.94■□□□□ 0.14
SNX17-204ENST00000453453 RNF217Q8TC41 542 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 NXPE3Q969Y0 559 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 ZNF419Q96HQ0 510 aaPredicted RBP15.94■□□□□ 0.14
SNX17-204ENST00000453453 SEMA3CQ99985 751 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 MLPHQ9BV36 600 aaPredicted RBP15.94■□□□□ 0.14
SNX17-204ENST00000453453 PHF7Q9BWX1 381 aaPredicted RBP15.94■□□□□ 0.14
SNX17-204ENST00000453453 WWP1Q9H0M0 922 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 EPB41L1Q9H4G0 881 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 COMMD3-BMI1R4GMX3 469 aa15.94■□□□□ 0.14
SNX17-204ENST00000453453 CAPN14A8MX76 684 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 C2CD4DB7Z1M9 353 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 SERPINF2P08697 491 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 NNMTP40261 264 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 CD86P42081 329 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 ACTR3P61158 418 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 ECT2LQ008S8 904 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 DSC2Q02487 901 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 SLC14A2Q15849 920 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 PUS10Q3MIT2 529 aaKnown RBP15.93■□□□□ 0.14
SNX17-204ENST00000453453 RALGPS1Q5JS13 557 aa15.93■□□□□ 0.14
SNX17-204ENST00000453453 ARHGAP22Q7Z5H3 698 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms