RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CATSPERZQ9NTU4 200 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 ILVBLA1L0T0 632 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 GOLGA8CPA6NN73 597 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 K7ERQ8 282 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 RPP40O75818 363 aaKnown RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 MT-CO1P00395 513 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 ARF5P84085 180 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 CDH18Q13634 790 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 CCDC6Q16204 474 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 LRRC26Q2I0M4 334 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 CXorf57Q6NSI4 855 aaKnown RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 MRNIPQ6NTE8 343 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 KLHDC10Q6PID8 442 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 LSMEM2Q8N112 164 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 MDGA1Q8NFP4 955 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 WFDC5Q8TCV5 224 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 NAT14Q8WUY8 206 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 OVCA2Q8WZ82 227 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 TSPAN17Q96FV3 270 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 CDKN2AIPNLQ96HQ2 116 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 MYRFLQ96LU7 910 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 SMG9Q9H0W8 520 aaKnown RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 RNPEPL1Q9HAU8 725 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 SAGE1Q9NXZ1 904 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 NOP53Q9NZM5 478 aaKnown RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 RAI2Q9Y5P3 530 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 MATN2O00339 956 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 HDAC3O15379 428 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 BNIP3LO60238 219 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 H2AFYO75367 372 aaKnown RBP11.8□□□□□ -0.52
VTA1-203ENST00000452973 TMCC1O94876 653 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 RAG1P15918 1043 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 FMO4P31512 558 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 KCNC1P48547 511 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 COPAP53621 1224 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 EPHB1P54762 984 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 MTA1Q13330 715 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 ACSBG2Q5FVE4 666 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 FBXO48Q5FWF7 155 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 ZNF549Q6P9A3 640 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 ZNF784Q8NCA9 323 aaPredicted RBP11.8□□□□□ -0.52
VTA1-203ENST00000452973 DDI1Q8WTU0 396 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 NCKIPSDQ9NZQ3 722 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 TSR3Q9UJK0 312 aaKnown RBP11.8□□□□□ -0.52
VTA1-203ENST00000452973 CDH23Q9H251 3354 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 GPR39O43194 453 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 KRT36O76013 467 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 BMP1P13497 986 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 ARSAP15289 507 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 AOC1P19801 751 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 ATP5F1P24539 256 aaPredicted RBP11.8□□□□□ -0.52
VTA1-203ENST00000452973 KPNA2P52292 529 aaKnown RBP11.8□□□□□ -0.52
VTA1-203ENST00000452973 WDR5P61964 334 aaKnown RBP11.8□□□□□ -0.52
VTA1-203ENST00000452973 PRKAA1Q13131 559 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 CUL3Q13618 768 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 RAB33AQ14088 237 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 LSM12Q3MHD2 195 aaKnown RBP11.8□□□□□ -0.52
VTA1-203ENST00000452973 C5orf22Q49AR2 442 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 TECRLQ5HYJ1 363 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 SDCCAG8Q86SQ7 713 aaPredicted RBP11.8□□□□□ -0.52
VTA1-203ENST00000452973 HERC6Q8IVU3 1022 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 SCUBE1Q8IWY4 988 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 HS6ST3Q8IZP7 471 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 MAGEC3Q8TD91 643 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 CCDC124Q96CT7 223 aaKnown RBP11.8□□□□□ -0.52
VTA1-203ENST00000452973 CATSPER2Q96P56 530 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 STN1Q9H668 368 aaKnown RBP11.8□□□□□ -0.52
VTA1-203ENST00000452973 PCDHB9Q9Y5E1 797 aa11.8□□□□□ -0.52
VTA1-203ENST00000452973 A8MT66 165 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 CRTAMO95727 393 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 PRLP01236 227 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 EPOP01588 193 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 CTPS1P17812 591 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 POLD2P49005 469 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 RHOAP61586 193 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 ASPHQ12797 758 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 RCN1Q15293 331 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 FAM91A1Q658Y4 838 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 SETD3Q86TU7 594 aaPredicted RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 ARHGAP24Q8N264 748 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 CFAP61Q8NHU2 1237 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 STMN2Q93045 179 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 ZNF689Q96CS4 500 aaPredicted RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 TRIB3Q96RU7 358 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 PACSIN3Q9UKS6 424 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 ABHD14A-ACY1A0A1B0GW23 586 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 TYW5A2RUC4 315 aaKnown RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 TRIM43BA6NCK2 446 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 C2orf81A6NN90 581 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 A8MX80 341 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 GRID2O43424 1007 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 SUPT7LO94864 414 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 SORBS2O94875 1100 aaKnown RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 ALOX15P16050 662 aaPredicted RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 SP100P23497 879 aaPredicted RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 GKP32189 559 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 CSKP41240 450 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 PDAP1Q13442 181 aaKnown RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 WASHC2DQ5SRD0 308 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 ULK2Q8IYT8 1036 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms