RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ELOCQ15369 112 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 CNGA3Q16281 694 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 PERM1Q5SV97 790 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 MARC1Q5VT66 337 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 ALG1LQ6GMV1 187 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 ESRP1Q6NXG1 681 aaKnown RBP12.51□□□□□ -0.41
CPSF4-208ENST00000452047 LVRNQ6Q4G3 990 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 H2AFVQ71UI9 128 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 CBARPQ8N350 705 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-208ENST00000452047 BBS5Q8N3I7 341 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 SDR16C5Q8N3Y7 309 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 PAF1Q8N7H5 531 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 OR8K1Q8NGG5 319 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 SNIP1Q8TAD8 396 aaKnown RBP12.51□□□□□ -0.41
CPSF4-208ENST00000452047 PDCD6IPQ8WUM4 868 aaKnown RBP12.51□□□□□ -0.41
CPSF4-208ENST00000452047 HNRNPLLQ8WVV9 542 aaKnown RBP12.51□□□□□ -0.41
CPSF4-208ENST00000452047 CTNNBL1Q8WYA6 563 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-208ENST00000452047 OR1E3Q8WZA6 343 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 MAML1Q92585 1016 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 FAF2Q96CS3 445 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 DEPDC7Q96QD5 511 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 MCCC1Q96RQ3 725 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-208ENST00000452047 RBM15Q96T37 977 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPSF4-208ENST00000452047 FGF22Q9HCT0 170 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 KLQ9UEF7 1012 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 DGKBQ9Y6T7 804 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 KALRNO60229 2985 aa12.51□□□□□ -0.41
CPSF4-208ENST00000452047 NPIPB15A6NHN6 443 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-208ENST00000452047 CASC3O15234 703 aaKnown RBP12.5□□□□□ -0.41
CPSF4-208ENST00000452047 CBFA2T2O43439 604 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 CSO75390 466 aaKnown RBP12.5□□□□□ -0.41
CPSF4-208ENST00000452047 HEXIM1O94992 359 aaKnown RBP12.5□□□□□ -0.41
CPSF4-208ENST00000452047 PGLSO95336 258 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 ALPIP09923 528 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 TMEM253P0C7T8 217 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 VIPR1P32241 457 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 GJC1P36383 396 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 EIF2S3P41091 472 aaKnown RBP12.5□□□□□ -0.41
CPSF4-208ENST00000452047 RPIAP49247 311 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 IHHQ14623 411 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 ACOX1Q15067 660 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 PDK2Q15119 407 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 TCEA2Q15560 299 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 ANKRD20A8PQ5CZ79 823 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 PDZD3Q86UT5 571 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 VSTM4Q8IW00 320 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 PQLC3Q8N755 202 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 ARL10Q8N8L6 244 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 KYQ8NBH2 561 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 OR56A4Q8NGH8 313 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 ATL2Q8NHH9 583 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 NSMCE1Q8WV22 266 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 GLMNQ92990 594 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 NAT6Q93015 286 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 FATE1Q969F0 183 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 DCBLD2Q96PD2 775 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 LGR4Q9BXB1 951 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 ABCG4Q9H172 646 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 WDR26Q9H7D7 661 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 NT5MQ9NPB1 228 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 ABHD10Q9NUJ1 306 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 LCMT1Q9UIC8 334 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 PHTF1Q9UMS5 762 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 PPIL1Q9Y3C6 166 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 PTPRQQ9UMZ3 2332 aa12.5□□□□□ -0.41
CPSF4-208ENST00000452047 KIF26BQ2KJY2 2108 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 A0A1W2PNU3 283 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-208ENST00000452047 CACNB4O00305 520 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-208ENST00000452047 TNFRSF10CO14798 259 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 FZD6O60353 706 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 MFAP3LO75121 409 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 USP12O75317 370 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 TCEA3O75764 348 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 DXOO77932 396 aaKnown RBP12.49□□□□□ -0.41
CPSF4-208ENST00000452047 MAP3K6O95382 1288 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 PDHA1P08559 390 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 KRT7P08729 469 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 CTSEP14091 401 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 PDX1P52945 283 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 GBE1Q04446 702 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 PTPRRQ15256 657 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 ISXQ2M1V0 245 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 TBC1D25Q3MII6 688 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 ARMC12Q5T9G4 340 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 PNCKQ6P2M8 343 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 CRTC1Q6UUV9 634 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 RD3Q7Z3Z2 195 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 HSD11B1LQ7Z5J1 315 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 TSPAN33Q86UF1 283 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 KCTD6Q8NC69 237 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 TPCN2Q8NHX9 752 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 PIH1D2Q8WWB5 315 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 NUS1Q96E22 293 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 DTD2Q96FN9 168 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 SCRN2Q96FV2 425 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 CRELD1Q96HD1 420 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 TSGA13Q96PP4 275 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 CHP1Q99653 195 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 SEMA3CQ99985 751 aa12.49□□□□□ -0.41
CPSF4-208ENST00000452047 CCDC3Q9BQI4 270 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms