RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 EGFRP00533 1210 aa12.44□□□□□ -0.42
UBE3B-204ENST00000449510 BDNFP23560 247 aa12.44□□□□□ -0.42
UBE3B-204ENST00000449510 SLC7A1P30825 629 aa12.44□□□□□ -0.42
UBE3B-204ENST00000449510 IST1P53990 364 aa12.44□□□□□ -0.42
UBE3B-204ENST00000449510 RAB39AQ14964 217 aa12.44□□□□□ -0.42
UBE3B-204ENST00000449510 PCID2Q5JVF3 399 aa12.44□□□□□ -0.42
UBE3B-204ENST00000449510 ADGRG6Q86SQ4 1221 aa12.44□□□□□ -0.42
UBE3B-204ENST00000449510 SLC44A2Q8IWA5 706 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-204ENST00000449510 ZNF540Q8NDQ6 660 aa12.44□□□□□ -0.42
UBE3B-204ENST00000449510 HGH1Q9BTY7 390 aa12.44□□□□□ -0.42
UBE3B-204ENST00000449510 NXF3Q9H4D5 531 aaKnown RBP12.44□□□□□ -0.42
UBE3B-204ENST00000449510 HACD1B0YJ81 288 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 PIP5K1BO14986 540 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 MYL3P08590 195 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 ADRA1BP35368 520 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 GEMP55040 296 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 SYT16Q17RD7 645 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 FIBCD1Q8N539 461 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 MUS81Q96NY9 551 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 CNGB3Q9NQW8 809 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 CACNA2D2Q9NY47 1150 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 ABI2Q9NYB9 513 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-204ENST00000449510 TEKT2Q9UIF3 430 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 CCDC88AQ3V6T2 1871 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 LRRC14BA6NHZ5 514 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 H3BNH8 94 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 H3BRB1 525 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 MSI1O43347 362 aaKnown RBP12.43□□□□□ -0.42
UBE3B-204ENST00000449510 NDUFB5O43674 189 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 B4GALT4O60513 344 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 SNAP91O60641 907 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 CHRM5P08912 532 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-204ENST00000449510 FCGR1AP12314 374 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 ANKS6Q68DC2 871 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 HFE2Q6ZVN8 426 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 PIM3Q86V86 326 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 BBS5Q8N3I7 341 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 SLC15A4Q8N697 577 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 SEPT8Q92599 483 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 TPD52L3Q96J77 140 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 RPRD1AQ96P16 312 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-204ENST00000449510 CYP2S1Q96SQ9 504 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 XYLT2Q9H1B5 865 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 SPON1Q9HCB6 807 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 ZNF232Q9UNY5 417 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 VWA7Q9Y334 891 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 CEPT1Q9Y6K0 416 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 HMX2A2RU54 273 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 PDZK1P1A8MUH7 402 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 UBXN8O00124 270 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 DENRO43583 198 aaKnown RBP12.43□□□□□ -0.42
UBE3B-204ENST00000449510 ATE1O95260 518 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 GLP2RO95838 553 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 PTPRAP18433 802 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 NOS2P35228 1153 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 PRKAA2P54646 552 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 RELAQ04206 551 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 SDHAF4Q5VUM1 108 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 ABI1Q8IZP0 508 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 SNX19Q92543 992 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 OTULINQ96BN8 352 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 ZHX1-C8orf76Q96EF9 292 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 CENPNQ96H22 339 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-204ENST00000449510 HIPK3Q9H422 1215 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 EVLQ9UI08 416 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-204ENST00000449510 ADAM28Q9UKQ2 775 aa12.43□□□□□ -0.42
UBE3B-204ENST00000449510 CAB39Q9Y376 341 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-204ENST00000449510 A8MV72 311 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 CLDN25C9JDP6 229 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 AZIN1O14977 448 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 FARP2O94887 1054 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 AP2A1O95782 977 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 NTRK1P04629 796 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 AZGP1P25311 298 aaKnown RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 TTKP33981 857 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 MTHFRP42898 656 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 BCAP31P51572 246 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 BMXP51813 675 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 DGUOKQ16854 277 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 PIGGQ5H8A4 983 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 TXNDC5Q8NBS9 432 aaKnown RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 FAM120BQ96EK7 910 aaKnown RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 SLC10A4Q96EP9 437 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 SMURF2Q9HAU4 748 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 MOCS1Q9NZB8 636 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 MAGED1Q9Y5V3 778 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 ATG7O95352 703 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 CPSF4O95639 269 aaKnown RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 SLC1A2P43004 574 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 HARS2P49590 506 aaKnown RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 PTPRCAPQ14761 206 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 MEP1AQ16819 746 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 DUS1LQ6P1R4 473 aaKnown RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 FLAD1Q8NFF5 587 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 BPIFA1Q9NP55 256 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 RIC8BQ9NVN3 520 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 COMMD8Q9NX08 183 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 IGSF9Q9P2J2 1179 aa12.42□□□□□ -0.42
UBE3B-204ENST00000449510 UBQLN1Q9UMX0 589 aaKnown RBP12.42□□□□□ -0.42
UBE3B-204ENST00000449510 FUOMA2VDF0 154 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms