RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 P3H1Q32P28 736 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 LRRC73Q5JTD7 316 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 LIPIQ6XZB0 460 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 Q6ZSR6 202 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 ARHGEF18Q6ZSZ5 1173 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 SDR16C5Q8N3Y7 309 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 NUS1Q96E22 293 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 FCRL5Q96RD9 977 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 MCCC1Q96RQ3 725 aaPredicted RBP12.29□□□□□ -0.44
LTBR-204ENST00000444814 CDC6Q99741 560 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 EBF2Q9HAK2 575 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 PKD2L2Q9NZM6 624 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 CHKBQ9Y259 395 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 OTOGLQ3ZCN5 2332 aa12.29□□□□□ -0.44
LTBR-204ENST00000444814 CEP192Q8TEP8 1941 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 ZFHX2Q9C0A1 2572 aaPredicted RBP12.28□□□□□ -0.44
LTBR-204ENST00000444814 FAM186AA6NE01 2351 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 A0A0J9YYE9 177 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 A0A1B0GTQ1 180 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 FZD6O60353 706 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 RECQL5O94762 991 aaPredicted RBP12.28□□□□□ -0.44
LTBR-204ENST00000444814 HEXIM1O94992 359 aaKnown RBP12.28□□□□□ -0.44
LTBR-204ENST00000444814 NDST3O95803 873 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 TRBC1P01850 177 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 ALPPL2P10696 532 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 TSHRP16473 764 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 RBL1P28749 1068 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 GRK6P43250 576 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 RXRGP48443 463 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 HNRNPKP61978 463 aaKnown RBP eCLIP12.28□□□□□ -0.442e-6■■□□□ 14.3
LTBR-204ENST00000444814 SKOR1P84550 965 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 ZDHHC20Q5W0Z9 365 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 ERMP1Q7Z2K6 904 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 PARGQ86W56 976 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 SLC13A5Q86YT5 568 aaPredicted RBP12.28□□□□□ -0.44
LTBR-204ENST00000444814 NRSN1Q8IZ57 195 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 CNTD1Q8N815 330 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 PIH1D2Q8WWB5 315 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 UBXN4Q92575 508 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 PBKQ96KB5 322 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 RBM15Q96T37 977 aaKnown RBP eCLIP12.28□□□□□ -0.44
LTBR-204ENST00000444814 GBA3Q9H227 469 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 HACD3Q9P035 362 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 FEZ2Q9UHY8 353 aaPredicted RBP12.28□□□□□ -0.44
LTBR-204ENST00000444814 RPS6KL1Q9Y6S9 549 aa12.28□□□□□ -0.44
LTBR-204ENST00000444814 TNRC6BQ9UPQ9 1833 aaKnown RBP12.28□□□□□ -0.44
LTBR-204ENST00000444814 A0A0U1RQJ8 604 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 TTC24A2A3L6 582 aaPredicted RBP12.27□□□□□ -0.44
LTBR-204ENST00000444814 ANKRD66B4E2M5 251 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 GAS8O95995 478 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 CEACAM1P13688 526 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 HLA-DPA1P20036 260 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 NIPAL4Q0D2K0 466 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 RALGDSQ12967 914 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 PDE1CQ14123 709 aaPredicted RBP12.27□□□□□ -0.44
LTBR-204ENST00000444814 PCSK7Q16549 785 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 C4orf22Q6V702 233 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 GCNT7Q6ZNI0 430 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 ZSWIM9Q86XI8 627 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 ZNF567Q8N184 647 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 SETD7Q8WTS6 366 aaKnown RBP12.27□□□□□ -0.44
LTBR-204ENST00000444814 CENPTQ96BT3 561 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 SPATA13Q96N96 652 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 LYSMD1Q96S90 227 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 CEP41Q9BYV8 373 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 TRABDQ9H4I3 376 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 MAGEE1Q9HCI5 957 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 FZD3Q9NPG1 666 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 PHPT1Q9NRX4 125 aaPredicted RBP12.27□□□□□ -0.44
LTBR-204ENST00000444814 GGT7Q9UJ14 662 aa12.27□□□□□ -0.44
LTBR-204ENST00000444814 PTPRZ1P23471 2315 aaPredicted RBP12.27□□□□□ -0.45
LTBR-204ENST00000444814 C1orf232A0A0U1RR37 186 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 C5orf60A6NFR6 353 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 H0Y8X5 98 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 SPINT1O43278 529 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 CEP104O60308 925 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 PMPCBO75439 489 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 GJB3O75712 270 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 WNT1P04628 370 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 FGF1P05230 155 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 NFKB1P19838 968 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 TEAD1P28347 426 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 HNF1BP35680 557 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 CLDN2P57739 230 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 PFN3P60673 137 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 ADCY2Q08462 1091 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 WASHC5Q12768 1159 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 KLF1Q13351 362 aaPredicted RBP12.26□□□□□ -0.45
LTBR-204ENST00000444814 PEX6Q13608 980 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 IRF4Q15306 451 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 CNGA3Q16281 694 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 ZNF569Q5MCW4 686 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 DENND2CQ68D51 928 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 MACC1Q6ZN28 852 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 ZNF765Q7L2R6 523 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 NLRP8Q86W28 1048 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 NAXDQ8IW45 347 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 CCDC89Q8N998 374 aa12.26□□□□□ -0.45
LTBR-204ENST00000444814 TP53I13Q8NBR0 393 aaPredicted RBP12.26□□□□□ -0.45
LTBR-204ENST00000444814 OR13H1Q8NG92 308 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms