RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 SLC36A3Q495N2 470 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ZNF667Q5HYK9 610 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 NEK5Q6P3R8 708 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 RETREG3Q86VR2 466 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 TMEM126BQ8IUX1 230 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 DENND6AQ8IWF6 608 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 SULF1Q8IWU6 871 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 SLC22A15Q8IZD6 547 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CELF2-AS1Q8N7Q2 184 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 FAM83FQ8NEG4 500 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 OR10Q1Q8NGQ4 319 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 OR13F1Q8NGS4 319 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CLEC4CQ8WTT0 213 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 RAB2BQ8WUD1 216 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 PTCD2Q8WV60 388 aaKnown RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ARNTL2Q8WYA1 636 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ELMO2Q96JJ3 720 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 NECTIN4Q96NY8 510 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CGREF1Q99674 301 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 RBBP8Q99708 897 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 FRMD8P1Q9BZ68 369 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 BRINP2Q9C0B6 783 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 PLSCR3Q9NRY6 295 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 IPO11Q9UI26 975 aaKnown RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 BTRCQ9Y297 605 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 PCP4L1A6NKN8 68 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 C19orf81C9J6K1 198 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 SUPT7LO94864 414 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 LDLRP01130 860 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 SLC4A1P02730 911 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 UGT2B4P06133 528 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 GJB1P08034 283 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 DBTP11182 482 aaKnown RBP7.55□□□□□ -1.2
HDAC9-214ENST00000441542 LCP1P13796 627 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 IFNA8P32881 189 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 NAMPTP43490 491 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 RAB15P59190 212 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 EMC2Q15006 297 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 ACAP2Q15057 778 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 DUOXA2Q1HG44 320 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 FAM83EQ2M2I3 478 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 LRIT3Q3SXY7 679 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 CYBRD1Q53TN4 286 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 ZNF773Q6PK81 442 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 KCNMB4Q86W47 210 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 PLD3Q8IV08 490 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 C4orf19Q8IY42 314 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 LSMEM2Q8N112 164 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 SCML4Q8N228 414 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 NIPA2Q8N8Q9 360 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 ANKFN1Q8N957 763 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 HMGCLL1Q8TB92 370 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 ATL1Q8WXF7 558 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 LRRC39Q96DD0 335 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 GMCL1Q96IK5 515 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 UROC1Q96N76 676 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 DEPDC7Q96QD5 511 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 FEM1AQ9BSK4 669 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-214ENST00000441542 VPS33BQ9H267 617 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 ATXN3LQ9H3M9 355 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 DNMT3BQ9UBC3 853 aaKnown RBP7.55□□□□□ -1.2
HDAC9-214ENST00000441542 CNOT11Q9UKZ1 510 aaKnown RBP7.55□□□□□ -1.2
HDAC9-214ENST00000441542 IFT52Q9Y366 437 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 PCDHA10Q9Y5I2 948 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 CSADQ9Y600 493 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 COL14A1Q05707 1796 aaKnown RBP7.55□□□□□ -1.2
HDAC9-214ENST00000441542 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-214ENST00000441542 TCRBV3S1A0A5B6 114 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 ARPC2O15144 300 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 SSX4O60224 188 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 ICMTO60725 284 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 HSPA1AP0DMV8 641 aaKnown RBP7.55□□□□□ -1.2
HDAC9-214ENST00000441542 HSPA1BP0DMV9 641 aaKnown RBP7.55□□□□□ -1.2
HDAC9-214ENST00000441542 MBL2P11226 248 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-214ENST00000441542 HLCSP50747 726 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 ZNF143P52747 638 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-214ENST00000441542 CEP78Q5JTW2 689 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 AGAP7PQ5VUJ5 663 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 RAP1GAP2Q684P5 730 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 DESI1Q6ICB0 168 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 LYPD8Q6UX82 237 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 C11orf74Q86VG3 221 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 ARMC8Q8IUR7 673 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 LRRC71Q8N4P6 559 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 CHURC1Q8WUH1 139 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 TBC1D20Q96BZ9 403 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 OMA1Q96E52 524 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 SLC10A4Q96EP9 437 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 CENPNQ96H22 339 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-214ENST00000441542 HSFY1Q96LI6 401 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 CPNE1Q99829 537 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 ELOVL4Q9GZR5 314 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 MAGEE1Q9HCI5 957 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 IL37Q9NZH6 218 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 BFARQ9NZS9 450 aa7.55□□□□□ -1.2
HDAC9-214ENST00000441542 PAPPAQ13219 1627 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 A0A1W2PRQ8 180 aa7.54□□□□□ -1.2
HDAC9-214ENST00000441542 IFRD1O00458 451 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-214ENST00000441542 MFSD11O43934 449 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms