RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CBX4O00257 560 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SLC9A3R1O14745 358 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 HRO43593 1189 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SYNCRIPO60506 623 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SNAP91O60641 907 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SPAG7O75391 227 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PAGE1O75459 146 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 RFPL1O75677 317 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 C1RP00736 705 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 MPOP05164 745 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ZDHHC11BP0C7U3 371 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ADRA1DP25100 572 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 MZF1P28698 734 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 RBL1P28749 1068 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 MAT2AP31153 395 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GKP32189 559 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SERPINB6P35237 376 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 IL12RB1P42701 662 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PTGER3P43115 390 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 MAPK8P45983 427 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 NPY2RP49146 381 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PTPN5P54829 565 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 DYNLT1P63172 113 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 OCRLQ01968 901 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SF3A2Q15428 464 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ZKSCAN8Q15776 578 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TEX44Q53QW1 395 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ALFQ53S48 1182 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SH2D4BQ5SQS7 431 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ADGRF1Q5T601 910 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 METTL21CQ5VZV1 264 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 NCBP2-AS2Q69YL0 99 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ITPRIPL1Q6GPH6 555 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 UNC5AQ6ZN44 842 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ZNF534Q76KX8 674 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CHST9Q7L1S5 443 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ADGRG6Q86SQ4 1221 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 KBTBD6Q86V97 674 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 C4orf33Q8N1A6 199 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 OR52K2Q8NGK3 314 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GRIN3AQ8TCU5 1115 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PIGKQ92643 395 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 DNASE1L2Q92874 299 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 KLK6Q92876 244 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 IGSF8Q969P0 613 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 STAMBPL1Q96FJ0 436 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 EXOC2Q96KP1 924 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 FCRL2Q96LA5 508 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TSGA13Q96PP4 275 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SRPK1Q96SB4 655 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CPNE1Q99829 537 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TM6SF2Q9BZW4 377 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 MKRN2Q9H000 416 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ARRDC1-AS1Q9H2J1 176 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TNKS2Q9H2K2 1166 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 C8orf33Q9H7E9 229 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GPAMQ9HCL2 828 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 THAP1Q9NVV9 213 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 WDR70Q9NW82 654 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 STOML1Q9UBI4 398 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 BAIAP2L1Q9UHR4 511 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 VPS28Q9UK41 221 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 RAB23Q9ULC3 237 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 APOBEC2Q9Y235 224 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ANKRD6Q9Y2G4 727 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TCRBV7S3A2A0A539 114 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 TYW5A2RUC4 315 aaKnown RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 F5H5T6 163 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 FAM72CH0Y354 149 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 I6L893 689 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 K7ERQ8 282 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ADAM23O75077 832 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 KLHL2O95198 593 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 MT-CO1P00395 513 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CFIP05156 583 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 BPGMP07738 259 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SERPINA6P08185 405 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 T-ENOLP0DO92 83 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 NEFHP12036 1026 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 COL6A2P12110 1019 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ACADSP16219 412 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GNAZP19086 355 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 BCKDHBP21953 392 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 HOXD9P28356 352 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PPP3CCP48454 512 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 METAP1P53582 386 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 KCNJ2P63252 427 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 NRG1Q02297 640 aaPredicted RBP4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SEMA3BQ13214 749 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 DPYSQ14117 519 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 CRY1Q16526 586 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 GAB4Q2WGN9 574 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 FAM72AQ5TYM5 149 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PIK3R6Q5UE93 754 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 ANKRD20A3Q5VUR7 823 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 PM20D1Q6GTS8 502 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 SDE2Q6IQ49 451 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 FAM72DQ6L9T8 149 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 FBXL22Q6P050 247 aa4.79□□□□□ -1.64
EDEM3-203ENST00000439962 AAGABQ6PD74 315 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms