RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ALPIP09923 528 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 PEX5P50542 639 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 ZNF211Q13398 564 aaPredicted RBP24.08■■□□□ 1.45
CPNE1-217ENST00000439669 NFATC4Q14934 902 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 TAZQ16635 292 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 TFDP3Q5H9I0 405 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 FAXCQ5TGI0 409 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 B4GALNT4Q76KP1 1039 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 PLA2G15Q8NCC3 412 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 LMX1AQ8TE12 382 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 BTN2A2Q8WVV5 523 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 PIH1D2Q8WWB5 315 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 NUS1Q96E22 293 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 SCRN2Q96FV2 425 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 TDRD1Q9BXT4 1180 aaKnown RBP24.08■■□□□ 1.45
CPNE1-217ENST00000439669 BRD8Q9H0E9 1235 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 CHKBQ9Y259 395 aa24.08■■□□□ 1.45
CPNE1-217ENST00000439669 FZD6O60353 706 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 DKK1O94907 266 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 PECAM1P16284 738 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-217ENST00000439669 GM2AP17900 193 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 TGM2P21980 687 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 LHCGRP22888 699 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 CD86P42081 329 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 NR2C2P49116 596 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 ACADVLP49748 655 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 DAB2P98082 770 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 PPARDQ03181 441 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 IHHQ14623 411 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 PTPRRQ15256 657 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 ENPP7Q6UWV6 458 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 DHRS13Q6UX07 377 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 BZW1Q7L1Q6 419 aaKnown RBP24.07■■□□□ 1.44
CPNE1-217ENST00000439669 TSPAN33Q86UF1 283 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 CNTD1Q8N815 330 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 EXD1Q8NHP7 514 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 COQ10AQ96MF6 247 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 MCCC1Q96RQ3 725 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-217ENST00000439669 DESI2Q9BSY9 194 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 SLC13A1Q9BZW2 595 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 TCEAL2Q9H3H9 227 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-217ENST00000439669 NLGN3Q9NZ94 848 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 SAE1Q9UBE0 346 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-217ENST00000439669 SPASTQ9UBP0 616 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 MSRB2Q9Y3D2 182 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 PCDHGA1Q9Y5H4 931 aa24.07■■□□□ 1.44
CPNE1-217ENST00000439669 hCG_1818297A0A087WSY0 165 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 SCAMP1O15126 338 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 PJA2O43164 708 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 AQP9O43315 295 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 RFPL3O75679 317 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 CKMT2P17540 419 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 PROX2Q3B8N5 592 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 FAM182AQ5T1J6 154 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 HSD11B1LQ7Z5J1 315 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 TXLNBQ8N3L3 684 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 LPCAT1Q8NF37 534 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 ATL2Q8NHH9 583 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 KIAA1524Q8TCG1 905 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 P3H4Q92791 437 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 HAUS1Q96CS2 278 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 AGAP3Q96P47 875 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 SMIM14Q96QK8 99 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 PCDH9Q9HC56 1237 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 PNMA8BQ9ULN7 279 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-217ENST00000439669 PPIL1Q9Y3C6 166 aa24.06■■□□□ 1.44
CPNE1-217ENST00000439669 ARID1BQ8NFD5 2236 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-217ENST00000439669 K7ESM1 405 aa24.05■■□□□ 1.44
CPNE1-217ENST00000439669 PSMD11O00231 422 aa24.05■■□□□ 1.44
CPNE1-217ENST00000439669 CACNB4O00305 520 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-217ENST00000439669 CTNNA1P35221 906 aaKnown RBP24.05■■□□□ 1.44
CPNE1-217ENST00000439669 HNF1BP35680 557 aa24.05■■□□□ 1.44
CPNE1-217ENST00000439669 PRRT3Q5FWE3 981 aa24.05■■□□□ 1.44
CPNE1-217ENST00000439669 UNQ6494/PRO21346Q6UXR6 183 aa24.05■■□□□ 1.44
CPNE1-217ENST00000439669 HID1Q8IV36 788 aa24.05■■□□□ 1.44
CPNE1-217ENST00000439669 TFB1MQ8WVM0 346 aaKnown RBP24.05■■□□□ 1.44
CPNE1-217ENST00000439669 DTD2Q96FN9 168 aa24.05■■□□□ 1.44
CPNE1-217ENST00000439669 WDR92Q96MX6 357 aa24.05■■□□□ 1.44
CPNE1-217ENST00000439669 DUSP23Q9BVJ7 150 aa24.05■■□□□ 1.44
CPNE1-217ENST00000439669 KLQ9UEF7 1012 aa24.05■■□□□ 1.44
CPNE1-217ENST00000439669 CSNK1G3Q9Y6M4 447 aa24.05■■□□□ 1.44
CPNE1-217ENST00000439669 A0A0J9YYE9 177 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 A0A0U1RQS6 177 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 MACROD2A1Z1Q3 448 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 GOLGA6CA6NDK9 693 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 GOLGA6BA6NDN3 693 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 C1QTNF9BB2RNN3 333 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 TRBC1P01850 177 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 MMP2P08253 660 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 C1QTNF9P0C862 333 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 GOLGA6DP0CG33 693 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 GIMD1P0DJR0 217 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 ETV3P41162 512 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 BLKP51451 505 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 SKOR1P84550 965 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 ADCY2Q08462 1091 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 KIF5AQ12840 1032 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 C1orf61Q13536 156 aa24.04■■□□□ 1.44
CPNE1-217ENST00000439669 PRKD1Q15139 912 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-217ENST00000439669 PPP2R5EQ16537 467 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms