RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 TNIKQ9UKE5 1360 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 SALL3Q9BXA9 1300 aa3.7□□□□□ -1.82
HMGB1P12-201ENST00000438594 A0A087WWL8 130 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 LOC100653049A0A140TA62 436 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 A0A1B0GWJ7 208 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 OR2W5A6NFC9 320 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 EFCAB8A8MWE9 144 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 GCOM1H8Y6P7 765 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 RASGRF2O14827 1237 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 LDLRAD4O15165 306 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ADAMDEC1O15204 470 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZNF185O15231 689 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 SPRY1O43609 319 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 TADA2AO75478 443 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZNF821O75541 412 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 RASSF9O75901 435 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 AKAP3O75969 853 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 KRT34O76011 436 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 SEC14L2O76054 403 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 AK1P00568 194 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 PENKP01210 267 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 PRLP01236 227 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 UROSP10746 265 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 SRCP12931 536 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ERCC2P18074 760 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 NR2F2P24468 414 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZFP36P26651 326 aaKnown RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 PTPN4P29074 926 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 MC5RP33032 325 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 TTKP33981 857 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 PLA2G5P39877 138 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 AVPR1BP47901 424 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 KCNJ5P48544 419 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 STAT2P52630 851 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 PTTG1IPP53801 180 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 PRRX1P54821 245 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 CDH15P55291 814 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 HUNKP57058 714 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 TAP1Q03518 808 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 TAP2Q03519 686 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 RAPSNQ13702 412 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 DDX39BQ13838 428 aaKnown RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 KCNC3Q14003 757 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 HNRNPDQ14103 355 aaKnown RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 DPYSQ14117 519 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZNF273Q14593 569 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 LRIT3Q3SXY7 679 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 MCMDC2Q4G0Z9 681 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZNF766Q5HY98 468 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 PRAMEF9Q5VWM5 478 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 DGAT2L7PQ6IED9 249 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLFN12LQ6IEE8 588 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZDHHC24Q6UX98 284 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 KCTD9Q7L273 389 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 VASH2Q86V25 355 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 RASGRP3Q8IV61 690 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 PHC2Q8IXK0 858 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 CCDC65Q8IXS2 484 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZNF679Q8IYX0 411 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 FAM9CQ8IZT9 166 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 FAM185AQ8N0U4 392 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 MPP5Q8N3R9 675 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 FSTL5Q8N475 847 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZGPATQ8N5A5 531 aaKnown RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 MINDY1Q8N5J2 469 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 FAM184AQ8NB25 1140 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 TMEM116Q8NCL8 245 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 GPR156Q8NFN8 814 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 OR52E1Q8NGJ3 308 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 TEKT4Q8WW24 435 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 GAB3Q8WWW8 586 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 POMGNT1Q8WZA1 660 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 TNPO1Q92973 898 aaKnown RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 NKD2Q969F2 451 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 INTS12Q96CB8 462 aaKnown RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ERO1AQ96HE7 468 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 LINC00615Q96LM1 132 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 SAMD8Q96LT4 415 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 SPATA13Q96N96 652 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 HNRNPABQ99729 332 aaKnown RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 SH3GL1Q99961 368 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 PIMREGQ9BSJ6 248 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 SPATA5L1Q9BVQ7 753 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 NUP85Q9BW27 656 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 CARD6Q9BX69 1037 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 MRPL1Q9BYD6 325 aaKnown RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 TRIM2Q9C040 744 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 RIBC2Q9H4K1 309 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 POLR1BQ9H9Y6 1135 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 NGBQ9NPG2 151 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 FSCN3Q9NQT6 498 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZSCAN32Q9NX65 697 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 P4HTMQ9NXG6 502 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 IL20Q9NYY1 176 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 IL1RAPL1Q9NZN1 696 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 ITGA11Q9UKX5 1188 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 BAG5Q9UL15 447 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 GABRQQ9UN88 632 aa3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 PPIEQ9UNP9 301 aaKnown RBP3.69□□□□□ -1.82
HMGB1P12-201ENST00000438594 DLGAP4Q9Y2H0 992 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms