RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 AGO3Q9H9G7 860 aaKnown RBP15.89■□□□□ 0.14
PTPN13-204ENST00000436978 C8orf4Q9NR00 106 aa15.89■□□□□ 0.14
PTPN13-204ENST00000436978 CORO1AP31146 461 aaKnown RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 OR5B17Q8NGF7 314 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 GBA3Q9H227 469 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 MRPL39Q9NYK5 338 aaKnown RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 BBIP1A8MTZ0 92 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TRMOQ9BU70 441 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 COG5Q9UP83 839 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 LYVE1Q9Y5Y7 322 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 KPNA4O00629 521 aaPredicted RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 ITGB3BPQ13352 177 aaPredicted RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TRIM25Q14258 630 aaKnown RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 ENKURQ8TC29 256 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 C5orf60A6NFR6 353 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 SRRM3A6NNA2 597 aaPredicted RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 SNAP91O60641 907 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 PDE5AO76074 875 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 CTPS1P17812 591 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 PDK4Q16654 411 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 SPATA19Q7Z5L4 167 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 ASF1AQ9Y294 204 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 PCDHB9Q9Y5E1 797 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 MYH4Q9Y623 1939 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 GLTPD2A6NH11 291 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 E9PAM4 449 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TGDSO95455 350 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 SLC6A2P23975 617 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 RPL38P63173 70 aaKnown RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 LAPTM5Q13571 262 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 CAPN13Q6MZZ7 669 aaPredicted RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 BNIPLQ7Z465 357 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 ACE2Q9BYF1 805 aaPredicted RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 FAM192AQ9GZU8 254 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 ZFP14Q9HCL3 533 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 KCTD5Q9NXV2 234 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 PPIEQ9UNP9 301 aaKnown RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 HBS1LQ9Y450 684 aaKnown RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TBC1D3DA0A087WVF3 549 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TBC1D3IA0A087WXS9 549 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TBC1D3EA0A087X179 549 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TBC1D3KA0A087X1G2 549 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TBC1D3FA6NER0 549 aaPredicted RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TBC1D3LB9A6J9 549 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 PER2O15055 1255 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TBC1D3HP0C7X1 549 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 PRG2P13727 222 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TBC1D3GQ6DHY5 549 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TBC1D3CQ6IPX1 549 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 NPAS4Q8IUM7 802 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 TBC1D3Q8IZP1 549 aaPredicted RBP15.89■□□□□ 0.13
PTPN13-204ENST00000436978 GLIS3Q8NEA6 775 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 BAP1Q92560 729 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 SNX15Q9NRS6 342 aa15.89■□□□□ 0.13
PTPN13-204ENST00000436978 ISM1B1AKI9 464 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 CCL16O15467 120 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 PRKAG1P54619 331 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 PTGES3Q15185 160 aaKnown RBP15.88■□□□□ 0.13
PTPN13-204ENST00000436978 RBM23Q86U06 439 aaKnown RBP15.88■□□□□ 0.13
PTPN13-204ENST00000436978 HDAC10Q969S8 669 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 MBOAT7Q96N66 472 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 AIF1LQ9BQI0 150 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 A0A0G2JLL6 359 aaPredicted RBP15.88■□□□□ 0.13
PTPN13-204ENST00000436978 PRNPP04156 253 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 PCSK2P16519 638 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 CXCR3P49682 368 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 RPL7AP62424 266 aaKnown RBP15.88■□□□□ 0.13
PTPN13-204ENST00000436978 CACNG1Q06432 222 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 RFTN2Q52LD8 501 aaPredicted RBP15.88■□□□□ 0.13
PTPN13-204ENST00000436978 PRRT2Q7Z6L0 340 aaPredicted RBP15.88■□□□□ 0.13
PTPN13-204ENST00000436978 PEX5LQ8IYB4 626 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 C1orf50Q9BV19 199 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 GALNT8Q9NY28 637 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 PLIN4Q96Q06 1357 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 SNHG28P0DPA3 235 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 STAT5AP42229 794 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 GCNT7Q6ZNI0 430 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 ACSS3Q9H6R3 686 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 ERVW-1Q9UQF0 538 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 NUP98P52948 1817 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 FFAR3O14843 346 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 GPR42O15529 346 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 RSBN1Q5VWQ0 802 aaPredicted RBP15.88■□□□□ 0.13
PTPN13-204ENST00000436978 AADACL2Q6P093 401 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 LGMNQ99538 433 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 GMIPQ9P107 970 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 MAFBQ9Y5Q3 323 aaPredicted RBP15.88■□□□□ 0.13
PTPN13-204ENST00000436978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.88■□□□□ 0.13
PTPN13-204ENST00000436978 BTBD19C9JJ37 291 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 COX4I1P13073 169 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 GALNT18Q6P9A2 607 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 C17orf64Q86WR6 236 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 TEX47Q8TBZ9 253 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 RNF19AQ9NV58 838 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 C1RP00736 705 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 TAS2R41P59536 307 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 C16orf46Q6P387 395 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 ZNF671Q8TAW3 534 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 STYXQ8WUJ0 223 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 CLEC4MQ9H2X3 399 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms