RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 XPAP23025 273 aaPredicted RBP23.06■■□□□ 1.28
CPSF4-204ENST00000436336 SATB1Q01826 763 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 ACVR1Q04771 509 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 LRRC32Q14392 662 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 CNGA3Q16281 694 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 CDKN3Q16667 212 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 LONRF1Q17RB8 773 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 SKIDA1Q1XH10 827 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 KIAA0930Q6ICG6 404 aaPredicted RBP23.06■■□□□ 1.28
CPSF4-204ENST00000436336 TRMT10BQ6PF06 316 aaKnown RBP23.06■■□□□ 1.28
CPSF4-204ENST00000436336 TTC7BQ86TV6 843 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 TTC30BQ8N4P2 665 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 ARRDC3Q96B67 414 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 GPR63Q9BZJ6 419 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 ZFYVE1Q9HBF4 777 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 DYRK4Q9NR20 520 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 SLC2A6Q9UGQ3 507 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 KCTD3Q9Y597 815 aa23.06■■□□□ 1.28
CPSF4-204ENST00000436336 EXOC1LA0A1B0GW35 172 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 A0A1W2PQF6 199 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 NPIPB15A6NHN6 443 aaPredicted RBP23.05■■□□□ 1.28
CPSF4-204ENST00000436336 C1QAP02745 245 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 CYP2A6P11509 494 aaPredicted RBP23.05■■□□□ 1.28
CPSF4-204ENST00000436336 HMGCLP35914 325 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 PSMD8P48556 350 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 ZNF140P52738 457 aaPredicted RBP23.05■■□□□ 1.28
CPSF4-204ENST00000436336 COPAP53621 1224 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 POM121L1PQ3SYA9 428 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 KIAA1211LQ6NV74 962 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 LYSMD3Q7Z3D4 306 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 GJD3Q8N144 294 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 OR13J1Q8NGT2 312 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 NELL2Q99435 816 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 C19orf43Q9BQ61 176 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 TMEM109Q9BVC6 243 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 LTB4R2Q9NPC1 389 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 MMP17Q9ULZ9 603 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 C1orf232A0A0U1RR37 186 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 KANSL1LA0AUZ9 987 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 ADH1BP00325 375 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 IVLP07476 585 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 PSMA3P25788 255 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 TARSP26639 723 aaKnown RBP23.05■■□□□ 1.28
CPSF4-204ENST00000436336 SUOXP51687 545 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 CST6Q15828 149 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 KBTBD12Q3ZCT8 623 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 ZNF776Q68DI1 518 aaPredicted RBP23.05■■□□□ 1.28
CPSF4-204ENST00000436336 PDPK2PQ6A1A2 396 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 CRTC1Q6UUV9 634 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 ERLEC1Q96DZ1 483 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 ROPN1BQ9BZX4 212 aaPredicted RBP23.05■■□□□ 1.28
CPSF4-204ENST00000436336 ROPN1Q9HAT0 212 aaPredicted RBP23.05■■□□□ 1.28
CPSF4-204ENST00000436336 NLE1Q9NVX2 485 aaPredicted RBP23.05■■□□□ 1.28
CPSF4-204ENST00000436336 B4GALT6Q9UBX8 382 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 FETUBQ9UGM5 382 aa23.05■■□□□ 1.28
CPSF4-204ENST00000436336 FAM159BA6NKW6 160 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 BUD23O43709 281 aaKnown RBP23.04■■□□□ 1.28
CPSF4-204ENST00000436336 TCEA3O75764 348 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 COL9A1P20849 921 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 METAP1P53582 386 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 FAM193AP78312 1265 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 ZNF844Q08AG5 666 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 MGAT5Q09328 741 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 FBXL19Q6PCT2 694 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 KCNMB4Q86W47 210 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 UNC5BQ8IZJ1 945 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 SIX5Q8N196 739 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 OR13C4Q8NGS5 318 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 CDKL2Q92772 493 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 DNAJC1Q96KC8 554 aaKnown RBP23.04■■□□□ 1.28
CPSF4-204ENST00000436336 HDAC8Q9BY41 377 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 PPCSQ9HAB8 311 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 CD248Q9HCU0 757 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 PCDH12Q9NPG4 1184 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 PPANQ9NQ55 473 aaKnown RBP23.04■■□□□ 1.28
CPSF4-204ENST00000436336 C20orf96Q9NUD7 363 aaPredicted RBP23.04■■□□□ 1.28
CPSF4-204ENST00000436336 LRRK1Q38SD2 2015 aa23.04■■□□□ 1.28
CPSF4-204ENST00000436336 STX7O15400 261 aaKnown RBP23.03■■□□□ 1.28
CPSF4-204ENST00000436336 CLDN7O95471 211 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 SLC4A1P02730 911 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 C5AR1P21730 350 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 VIPR1P32241 457 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 ARCN1P48444 511 aaKnown RBP23.03■■□□□ 1.28
CPSF4-204ENST00000436336 NEK3P51956 506 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 LRRC73Q5JTD7 316 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 CEP85LQ5SZL2 805 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 ERAP2Q6P179 960 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 ERN2Q76MJ5 926 aaKnown RBP23.03■■□□□ 1.28
CPSF4-204ENST00000436336 CROCCP2Q86T23 111 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 OR4K2Q8NGD2 314 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 LMAN1LQ9HAT1 526 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 POLR3BQ9NW08 1133 aaPredicted RBP23.03■■□□□ 1.28
CPSF4-204ENST00000436336 IL17CQ9P0M4 197 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 VPS18Q9P253 973 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 PKP3Q9Y446 797 aa23.03■■□□□ 1.28
CPSF4-204ENST00000436336 AGPSO00116 658 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 RPP40O75818 363 aaKnown RBP23.02■■□□□ 1.28
CPSF4-204ENST00000436336 VAPBO95292 243 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 ADRB3P13945 408 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 ZNF30P17039 623 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms