RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SKA2Q8WVK7 121 aaPredicted RBP15.62■□□□□ 0.09
SCARF1-203ENST00000434376 PCDHAC1Q9H158 963 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 CCDC68Q9H2F9 335 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 AFF4Q9UHB7 1163 aaKnown RBP15.62■□□□□ 0.09
SCARF1-203ENST00000434376 PCDHB8Q9UN66 801 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 CDYLQ9Y232 598 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 DOCK6Q96HP0 2047 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 A0A088AWK7 358 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 CCDC162PA2VCL2 907 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 ENPP3O14638 875 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 GOT2P00505 430 aaKnown RBP15.62■□□□□ 0.09
SCARF1-203ENST00000434376 HNRNPCP07910 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
SCARF1-203ENST00000434376 SBK3P0C264 359 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 UQCRBP14927 111 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 GALK1P51570 392 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 HECTD2Q5U5R9 776 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 ACMSDQ8TDX5 336 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 TRPC4APQ8TEL6 797 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 NUDT8Q8WV74 236 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 FCRL5Q96RD9 977 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 VAT1Q99536 393 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 ENTPD7Q9NQZ7 604 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 OXSMQ9NWU1 459 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 ATXN10Q9UBB4 475 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 PCDHB12Q9Y5F1 795 aa15.62■□□□□ 0.09
SCARF1-203ENST00000434376 SUPT3HB4E1H0 165 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 F8W8V4 182 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 K7ERQ8 282 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 OR1I1O60431 355 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 SUPT3HO75486 399 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 SLC6A4P31645 630 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 PDAP1Q13442 181 aaKnown RBP15.61■□□□□ 0.09
SCARF1-203ENST00000434376 LIPMQ5VYY2 423 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 GPR22Q99680 433 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 OSBPL2Q9H1P3 480 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 FBXO44Q9H4M3 255 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 CREBZFQ9NS37 354 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 RRN3Q9NYV6 651 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 CIDEBQ9UHD4 219 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 FCF1Q9Y324 198 aaKnown RBP15.61■□□□□ 0.09
SCARF1-203ENST00000434376 COMMD3-BMI1R4GMX3 469 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 KLF11O14901 512 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 RHOBTB1O94844 696 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 CHRM3P20309 590 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 GK3PQ14409 553 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 BRMS1LQ5PSV4 323 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 TIFABQ6ZNK6 161 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 SLC22A12Q96S37 553 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 RNF208Q9H0X6 261 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 CHCHD3Q9NX63 227 aaKnown RBP15.61■□□□□ 0.09
SCARF1-203ENST00000434376 SRRDQ9UH36 339 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 PCDHGB4Q9UN71 923 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 ATP11BQ9Y2G3 1177 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 ZNF711Q9Y462 761 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 PCDHGB5Q9Y5G0 923 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 HDAC3O15379 428 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 FKBP6O75344 327 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 KLHL2O95198 593 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 GUCA1CO95843 209 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 MPOP05164 745 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 ITGAXP20702 1163 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 CRABP2P29373 138 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 HARS2P49590 506 aaKnown RBP15.61■□□□□ 0.09
SCARF1-203ENST00000434376 FOXD4Q12950 439 aaPredicted RBP15.61■□□□□ 0.09
SCARF1-203ENST00000434376 NADSYN1Q6IA69 706 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 FBXO22Q8NEZ5 403 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 CDK15Q96Q40 435 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 HAPLN3Q96S86 360 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 KIFC1Q9BW19 673 aa15.61■□□□□ 0.09
SCARF1-203ENST00000434376 CINPQ9BW66 212 aaPredicted RBP15.61■□□□□ 0.09
SCARF1-203ENST00000434376 TACR2P21452 398 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 TUBB3Q13509 450 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 RPS6KA2Q15349 733 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 SGO1Q5FBB7 561 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 RANBP10Q6VN20 620 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 PDSS2Q86YH6 399 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 CMTM5Q96DZ9 223 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 LRGUKQ96M69 825 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 MRPL46Q9H2W6 279 aaKnown RBP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 FAM124BQ9H5Z6 455 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 COPS7BQ9H9Q2 264 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 CDH22Q9UJ99 828 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 VWA7Q9Y334 891 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 PCDHB9Q9Y5E1 797 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 MAGEB16A2A368 324 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 ZNF487B1APH4 448 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 H0Y626 953 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 FGF10O15520 208 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 KATNA1O75449 491 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 CORO1AP31146 461 aaKnown RBP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 HOXC8P31273 242 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 CHN2P52757 468 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 DEFB115Q30KQ5 88 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 TSTD2Q5T7W7 516 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 TXNDC8Q6A555 127 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 BNIPLQ7Z465 357 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 PTGR2Q8N8N7 351 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 MIPOL1Q8TD10 442 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms