RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 ARHGAP40Q5TG30 622 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 FOXR1Q6PIV2 292 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 H2AFVQ71UI9 128 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 RD3Q7Z3Z2 195 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 CLEC14AQ86T13 490 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 CAMK1DQ8IU85 385 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 BBS5Q8N3I7 341 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 KYQ8NBH2 561 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 OR56A4Q8NGH8 313 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 SNRNP27Q8WVK2 155 aaKnown RBP14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 TSACCQ96A04 125 aaPredicted RBP14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 TMEM159Q96B96 161 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 CELF6Q96J87 481 aaKnown RBP14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 ZNF599Q96NL3 588 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 RBM15Q96T37 977 aaKnown RBP eCLIP14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 SLC39A8Q9C0K1 460 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 LUC7LQ9NQ29 371 aaKnown RBP14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 SEPT3Q9UH03 358 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 LCMT1Q9UIC8 334 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 OR1A2Q9Y585 309 aa14.96□□□□□ -0.01
RPUSD3-208ENST00000433972 MYO1FO00160 1098 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 DFFAO00273 331 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 PLD2O14939 933 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 ATMINO43313 823 aaPredicted RBP14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 TNFSF15O95150 251 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 PNLIPP16233 465 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 ERCC2P18074 760 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 HSPA9P38646 679 aaKnown RBP14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 INHBCP55103 352 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 SKOR1P84550 965 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 PEX6Q13608 980 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 PIGHQ14442 188 aaPredicted RBP14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 PPP6R3Q5H9R7 873 aaPredicted RBP14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 ZNF605Q86T29 641 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 NETO2Q8NC67 525 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 TSEN2Q8NCE0 465 aaKnown RBP14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 CCDC74AQ96AQ1 378 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 ECHDC3Q96DC8 303 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 SNRNP25Q9BV90 132 aaKnown RBP14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 THAP2Q9H0W7 228 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 SIRPGQ9P1W8 387 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 PCSK1NQ9UHG2 260 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 IP6K2Q9UHH9 426 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 PNMA8BQ9ULN7 279 aaPredicted RBP14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 BPTFQ12830 3046 aa14.95□□□□□ -0.02
RPUSD3-208ENST00000433972 CHD5Q8TDI0 1954 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 MYLKQ15746 1914 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 D6RAR5 112 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 H3BRJ5 948 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 BUB1BO60566 1050 aaPredicted RBP14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 SOCS5O75159 536 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 RECQL5O94762 991 aaPredicted RBP14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 PRB1P04280 392 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 GLB1P16278 677 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 ARL4AP40617 200 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 OGDHQ02218 1023 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 ZNF235Q14590 738 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 AFMIDQ63HM1 303 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 DPPA4Q7L190 304 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 TAF8Q7Z7C8 310 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 FBXO39Q8N4B4 442 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 KIAA1524Q8TCG1 905 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 NSMCE1Q8WV22 266 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 PRR11Q96HE9 360 aaPredicted RBP14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 PSKH2Q96QS6 385 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 CHP1Q99653 195 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 NUP85Q9BW27 656 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 WDR26Q9H7D7 661 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 CPNE5Q9HCH3 593 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 EPB41L5Q9HCM4 733 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 GPATCH2LQ9NWQ4 482 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 CTTNBP2NLQ9P2B4 639 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 APPL1Q9UKG1 709 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 PCDHGA7Q9Y5G6 932 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 DOCK9Q9BZ29 2069 aa14.94□□□□□ -0.02
RPUSD3-208ENST00000433972 K7ENP7 123 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 C1QL1O75973 258 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 IPO7O95373 1038 aaKnown RBP14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 CYP1A2P05177 515 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 RPLP0P05388 317 aaKnown RBP14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 JMJD7P0C870 316 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 KRT10P13645 584 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 MIPP30301 263 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 CCKBRP32239 447 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 PCK1P35558 622 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 CYLC1P35663 651 aaPredicted RBP14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 SCNN1BP51168 640 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 PDX1P52945 283 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 LBRQ14739 615 aaKnown RBP14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 SPA17Q15506 151 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 ASTE1Q2TB18 679 aaPredicted RBP14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 RALGPS1Q5JS13 557 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 INO80CQ6PI98 192 aaPredicted RBP14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 LIPIQ6XZB0 460 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 CCDC81Q6ZN84 652 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 RAB11FIP2Q7L804 512 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 CCNJLQ8IV13 435 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 CCDC170Q8IYT3 715 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 ZNF843Q8N446 348 aa14.93□□□□□ -0.02
RPUSD3-208ENST00000433972 TC2NQ8N9U0 490 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms