RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 UMODL1-AS1Q8N2C9 162 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 OR13C4Q8NGS5 318 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 DNAJC1Q96KC8 554 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 EML4Q9HC35 981 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 RGS18Q9NS28 235 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 LZTS1Q9Y250 596 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 TLR6Q9Y2C9 796 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 SLC27A5Q9Y2P5 690 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 MYO16Q9Y6X6 1858 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 COL4A4P53420 1690 aaPredicted RBP17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 DENRO43583 198 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 LDB2O43679 373 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 NELFEP18615 380 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 FOXA1P55317 472 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 SH3BP2P78314 561 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 MYBPC1Q00872 1141 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 TRIM25Q14258 630 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 RFTN1Q14699 578 aaPredicted RBP17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 GPR162Q16538 588 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 AMIGO2Q86SJ2 522 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 ARHGAP18Q8N392 663 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 MARVELD2Q8N4S9 558 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 ARRDC2Q8TBH0 407 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 CALML6Q8TD86 181 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 TRIB2Q92519 343 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 NSUN5Q96P11 429 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 KCNA7Q96RP8 456 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 SEMA3CQ99985 751 aa17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 PRDM5Q9NQX1 630 aaPredicted RBP17.42■□□□□ 0.38
SEMA3B-204ENST00000433753 IGHA2P01877 340 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 RBP1P09455 135 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 ALDOCP09972 364 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 SPATA31D3P0C874 917 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 PIM1P11309 404 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 OR1G1P47890 313 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 UNC50Q53HI1 259 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 ZNF678Q5SXM1 525 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 SPATA31D4Q6ZUB0 917 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 MON1AQ86VX9 555 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 NUP93Q8N1F7 819 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 CFAP52Q8N1V2 620 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 SMIM14Q96QK8 99 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 TRIM8Q9BZR9 551 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 ETAA1Q9NY74 926 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 GABRQQ9UN88 632 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 DOCK4Q8N1I0 1966 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 ANKRD33BA6NCL7 494 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 MROH6A6NGR9 719 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 TFAP2AP05549 437 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 ATXN1LP0C7T5 689 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 PABPC4LP0CB38 370 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 IMPDH1P20839 514 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 TIAL1Q01085 375 aaKnown RBP eCLIP17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 KCNA10Q16322 511 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 RTN4RL1Q86UN2 441 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 ASB9Q96DX5 294 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 C1orf74Q96LT6 269 aa17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 PRPF18Q99633 342 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-204ENST00000433753 A0A1B0GTL3 188 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 UBXN8O00124 270 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 GOT2P00505 430 aaKnown RBP17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 SNRPB2P08579 225 aaKnown RBP17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 RHOQP17081 205 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 STX5Q13190 355 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 GEN1Q17RS7 908 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 FUNDC1Q8IVP5 155 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 METTL25Q8N6Q8 603 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 EME1Q96AY2 570 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 RPRD1AQ96P16 312 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 RRAGCQ9HB90 399 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 VPS45Q9NRW7 570 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 POLR3BQ9NW08 1133 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 C7orf72A4D263 438 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 MRASO14807 208 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 RTN3O95197 1032 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 SQLEQ14534 574 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 POLD3Q15054 466 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 PFKFB4Q16877 469 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 MGAT5BQ3V5L5 792 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 ADCY4Q8NFM4 1077 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 NAT14Q8WUY8 206 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 SLCO4A1Q96BD0 722 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 TSPAN17Q96FV3 270 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 UNC93B1Q9H1C4 597 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 COQ10BQ9H8M1 238 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 AP4S1Q9Y587 144 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 SNX13Q9Y5W8 968 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 SCN4AP35499 1836 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 WASH4PA8MWX3 477 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 H3BMM5 538 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 HTR7P34969 479 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 NDST2P52849 883 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 OR4D1Q15615 310 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 LARP4Q71RC2 724 aaKnown RBP eCLIP17.4■□□□□ 0.385e-12■■□□□ 12.5
SEMA3B-204ENST00000433753 PTGR2Q8N8N7 351 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 UPF1Q92900 1129 aaKnown RBP eCLIP17.4■□□□□ 0.385e-9■■■■■ 29.1
SEMA3B-204ENST00000433753 CCDC126Q96EE4 140 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 GRIP2Q9C0E4 1043 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 MFSD1Q9H3U5 465 aa17.4■□□□□ 0.38
SEMA3B-204ENST00000433753 AKTIPQ9H8T0 292 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms