RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 C3orf58Q8NDZ4 430 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 CEP70Q8NHQ1 597 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 CHPT1Q8WUD6 406 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 ARNTL2Q8WYA1 636 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 HSPH1Q92598 858 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 RMND5BQ96G75 393 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-202ENST00000432306 KLHL32Q96NJ5 620 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 TAAR9Q96RI9 348 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 CPXM1Q96SM3 734 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 CDRT15Q96T59 188 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 CPNE1Q99829 537 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 MCMBPQ9BTE3 642 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 MSTO1Q9BUK6 570 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 CALN1Q9BXU9 219 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 COPS7BQ9H9Q2 264 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-202ENST00000432306 EFCAB1Q9HAE3 211 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 CLK4Q9HAZ1 481 aaKnown RBP8.11□□□□□ -1.11
VTI1A-202ENST00000432306 CRTAC1Q9NQ79 661 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 PXMP2Q9NR77 195 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 TBC1D23Q9NUY8 699 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 HPF1Q9NWY4 346 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 GIN1Q9NXP7 522 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 PKD2L1Q9P0L9 805 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 TMEM216Q9P0N5 145 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 FAF1Q9UNN5 650 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-202ENST00000432306 RAP2CQ9Y3L5 183 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 FADS3Q9Y5Q0 445 aa8.11□□□□□ -1.11
VTI1A-202ENST00000432306 LTBP2Q14767 1821 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 LOC100653049A0A140TA62 436 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 HACD1B0YJ81 288 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 B4GALT4O60513 344 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 TRIM13O60858 407 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 KRT34O76011 436 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 TOP3BO95985 862 aaKnown RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 MPOP05164 745 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 BMP2P12643 396 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 NCF2P19878 526 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 GPD1P21695 349 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 GABRB3P28472 473 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 SLC7A1P30825 629 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 GARSP41250 739 aaKnown RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 GPD2P43304 727 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 NUDT2P50583 147 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 NDST2P52849 883 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 COG7P83436 770 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 GALNT2Q10471 571 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 GRSF1Q12849 480 aaKnown RBP eCLIP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 MPP3Q13368 585 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 MTM1Q13496 603 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 TRIM25Q14258 630 aaKnown RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 STILQ15468 1287 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 TAF5Q15542 800 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 TGFBIQ15582 683 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 TAF12Q16514 161 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 NHSL2Q5HYW2 709 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 HACD2Q6Y1H2 254 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 LINC00299Q6ZSB3 139 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 KRT74Q7RTS7 529 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 FIBCD1Q8N539 461 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 OR2C3Q8N628 320 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 ZNF781Q8N8C0 355 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 HIPK4Q8NE63 616 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 BHLHE22Q8NFJ8 381 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 TNIP2Q8NFZ5 429 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 MAPK15Q8TD08 544 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 LPAR1Q92633 364 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 TFAP2CQ92754 450 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 ABTB1Q969K4 478 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 ISOC1Q96CN7 298 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 QKIQ96PU8 341 aaKnown RBP eCLIP8.1□□□□□ -1.116e-8■■■□□ 16.1
VTI1A-202ENST00000432306 CDX2Q99626 313 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 ACO2Q99798 780 aaKnown RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 TUBA1CQ9BQE3 449 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 YTHDF1Q9BYJ9 559 aaKnown RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 IL22Q9GZX6 179 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 DRC3Q9H069 523 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 TRIT1Q9H3H1 467 aaKnown RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 SLC38A10Q9HBR0 1119 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 WASH6PQ9NQA3 447 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 INIPQ9NRY2 104 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 ARMC1Q9NVT9 282 aa8.1□□□□□ -1.11
VTI1A-202ENST00000432306 DUS2Q9NX74 493 aaKnown RBP8.1□□□□□ -1.11
VTI1A-202ENST00000432306 ARHGEF37A1IGU5 675 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 FUOMA2VDF0 154 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 TCAF2A6NFQ2 919 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 K7ERI5 159 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 EIF3FO00303 357 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 TRIM24O15164 1050 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 HOXC11O43248 304 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 PAPSS1O43252 624 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-202ENST00000432306 METTL18O95568 372 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 MT-CO1P00395 513 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ADORA2AP29274 412 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 EPHA3P29320 983 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 PPM1AP35813 382 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 HADHAP40939 763 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 DPP6P42658 865 aa8.09□□□□□ -1.11
VTI1A-202ENST00000432306 ID4P47928 161 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms