RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 FFAR3O14843 346 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 GPR42O15529 346 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 NPHS1O60500 1241 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 IL4RP24394 825 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 RECQLP46063 649 aaPredicted RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 EIF2B2P49770 351 aaKnown RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 CCDC92Q53HC0 331 aaPredicted RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 INTS6LQ5JSJ4 861 aaKnown RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 FAM72AQ5TYM5 149 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 FAM72DQ6L9T8 149 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 NAPRTQ6XQN6 538 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ADGRG6Q86SQ4 1221 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 FAM72BQ86X60 149 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ZNF778Q96MU6 729 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 GPR22Q99680 433 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 AGO3Q9H9G7 860 aaKnown RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ATP13A1Q9HD20 1204 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 BPIFA1Q9NP55 256 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 PAPPAQ13219 1627 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 PHLPP1O60346 1717 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 GOLGA4Q13439 2230 aaKnown RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 IDO1P14902 403 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 HOXB8P17481 243 aaPredicted RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 NR4A1P22736 598 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 CLCNKBP51801 687 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 MAP3K10Q02779 954 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ARHGAP1Q07960 439 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 CEACAM7Q14002 265 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 NR1D2Q14995 579 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 PSMD5Q16401 504 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 EID3Q8N140 333 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 RORBQ92753 470 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ESAMQ96AP7 390 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ASB9Q96DX5 294 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 WDR83Q9BRX9 315 aaKnown RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ADI1Q9BV57 179 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 UGT2B28Q9BY64 529 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ZYG11BQ9C0D3 744 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 RIBC2Q9H4K1 309 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 FBXO44Q9H4M3 255 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ZFP14Q9HCL3 533 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 CNTN3Q9P232 1028 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 COL1A2P08123 1366 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 OR51F1A6NGY5 319 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 UBXN8O00124 270 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 NFKBIEO00221 500 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 SCAMP3O14828 347 aaKnown RBP12.65□□□□□ -0.38
CPNE4-201ENST00000429747 IL1BP01584 269 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 OR4Q2P0C623 313 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 PABPC4LP0CB38 370 aaKnown RBP12.65□□□□□ -0.38
CPNE4-201ENST00000429747 CCNCP24863 283 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 FSCN1Q16658 493 aaKnown RBP12.65□□□□□ -0.38
CPNE4-201ENST00000429747 DDR2Q16832 855 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 RBM20Q5T481 1227 aaKnown RBP12.65□□□□□ -0.38
CPNE4-201ENST00000429747 BROXQ5VW32 411 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 CXCL17Q6UXB2 119 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 TAGAPQ8N103 731 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 SH3GL1Q99961 368 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 ADAM2Q99965 735 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 SLC39A8Q9C0K1 460 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 ROGDIQ9GZN7 287 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 NMRK2Q9NPI5 230 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 FAM105AQ9NUU6 356 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 SCN7AQ01118 1682 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 A0A1B0GVG6 124 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 PIP5K1BO14986 540 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 SIX3O95343 332 aaPredicted RBP12.65□□□□□ -0.38
CPNE4-201ENST00000429747 DLGAP3O95886 979 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 IQCF3P0C7M6 154 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 CCNA2P20248 432 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 NAA20P61599 178 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 LRRC74AQ0VAA2 488 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 MAGED4Q96JG8 741 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 ZFYVE28Q9HCC9 887 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 FBRSL1Q9HCM7 1045 aaKnown RBP12.65□□□□□ -0.38
CPNE4-201ENST00000429747 TDRKHQ9Y2W6 561 aaKnown RBP12.65□□□□□ -0.38
CPNE4-201ENST00000429747 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.65□□□□□ -0.38
CPNE4-201ENST00000429747 H3BMM5 538 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 H3BNX3 289 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 SLC22A3O75751 556 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 BCAS2O75934 225 aaPredicted RBP12.65□□□□□ -0.38
CPNE4-201ENST00000429747 TKTP29401 623 aaKnown RBP12.65□□□□□ -0.38
CPNE4-201ENST00000429747 SLC7A1P30825 629 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 EPHX2P34913 555 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 FAM187BQ17R55 369 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 KLQ9UEF7 1012 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 INVSQ9Y283 1065 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 SQORQ9Y6N5 450 aa12.65□□□□□ -0.38
CPNE4-201ENST00000429747 MATN3O15232 486 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 ZBTB11O95625 1053 aaPredicted RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 CPSF4O95639 269 aaKnown RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 CXCR3P49682 368 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 CRYBB1P53674 252 aaPredicted RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 MRPS15P82914 257 aaKnown RBP12.64□□□□□ -0.39
CPNE4-201ENST00000429747 LIPEQ05469 1076 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 NIPAL4Q0D2K0 466 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 TRNP1Q6NT89 227 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 OSTM1Q86WC4 334 aa12.64□□□□□ -0.39
CPNE4-201ENST00000429747 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms