RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 CDO1Q16878 200 aa14.48□□□□□ -0.09
SYNGAP1-203ENST00000428982 KIZQ2M2Z5 673 aa14.48□□□□□ -0.09
SYNGAP1-203ENST00000428982 ATP13A4Q4VNC1 1196 aa14.48□□□□□ -0.09
SYNGAP1-203ENST00000428982 CHERPQ8IWX8 916 aaKnown RBP14.48□□□□□ -0.09
SYNGAP1-203ENST00000428982 SNX19Q92543 992 aa14.48□□□□□ -0.09
SYNGAP1-203ENST00000428982 SIPA1Q96FS4 1042 aa14.48□□□□□ -0.09
SYNGAP1-203ENST00000428982 SNX18Q96RF0 628 aa14.48□□□□□ -0.09
SYNGAP1-203ENST00000428982 TCF7L2Q9NQB0 619 aa14.48□□□□□ -0.09
SYNGAP1-203ENST00000428982 ARHGEF4Q9NR80 690 aa14.48□□□□□ -0.09
SYNGAP1-203ENST00000428982 SETD4Q9NVD3 440 aa14.48□□□□□ -0.09
SYNGAP1-203ENST00000428982 MORF4L1Q9UBU8 362 aa14.48□□□□□ -0.09
SYNGAP1-203ENST00000428982 QSER1Q2KHR3 1735 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 A8MV72 311 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 ETV1P50549 477 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 RPL7AP62424 266 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 COX10Q12887 443 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 KLF10Q13118 480 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 BSPRYQ5W0U4 402 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 SYCE2Q6PIF2 218 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 AMIGO1Q86WK6 493 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 SLC35B2Q8TB61 432 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 UBASH3BQ8TF42 649 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 GIMAP1Q8WWP7 306 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 MYH11P35749 1972 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 RGSL1A5PLK6 1076 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 H0Y858 1186 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 PIK3R2O00459 728 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 HDAC3O15379 428 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 CA12O43570 354 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 RGS20O76081 388 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 PIGRP01833 764 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 FGFR1P11362 822 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 RACK1P63244 317 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 FSCN1Q16658 493 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 CLEC4FQ8N1N0 589 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 VANGL1Q8TAA9 524 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 ADAMTSL1Q8N6G6 1762 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 HEATR9A2RTY3 570 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 MAFO75444 373 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 VTNP04004 478 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 GRIK1P39086 918 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 MFSD10Q14728 455 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 MCFD2Q8NI22 146 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 CPT1BQ92523 772 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 NXNL1Q96CM4 212 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 RCN3Q96D15 328 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 A0A0B4J269 797 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 TRIM38O00635 465 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 TRIM24O15164 1050 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 H2AFYO75367 372 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 LYPLA1O75608 230 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 CTSHP09668 335 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 PSMA4P25789 261 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 UQCRC1P31930 480 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 BMPR2Q13873 1038 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 NFE2L1Q14494 772 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 METTL2BQ6P1Q9 378 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 DCLRE1AQ6PJP8 1040 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 MPZL3Q6UWV2 235 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 CBR4Q8N4T8 237 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 LEMD2Q8NC56 503 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 PPTC7Q8NI37 304 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 APOL4Q9BPW4 351 aa14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 ZNF395Q9H8N7 513 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 CNOT11Q9UKZ1 510 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-203ENST00000428982 A0A087WZ62 844 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 KLF11O14901 512 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 TIPRLO75663 272 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 CALCAP01258 141 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 TYK2P29597 1187 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 YAP1P46937 504 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 RBP5P82980 135 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 TRAF3Q13114 568 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 BSNDQ8WZ55 320 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 KIF12Q96FN5 646 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 FDXACB1Q9BRP7 624 aaPredicted RBP14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 TBC1D4O60343 1298 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 CBX5P45973 191 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 PSEN2P49810 448 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 NOTUMQ6P988 496 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 SEPT8Q92599 483 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 LRFN2Q9ULH4 789 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 RNF11Q9Y3C5 154 aa14.46□□□□□ -0.09
SYNGAP1-203ENST00000428982 SDR42E2A6NKP2 422 aa14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 H0YJX3 145 aa14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 CASP3P42574 277 aa14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 PTPN11Q06124 597 aaPredicted RBP14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 SLX4IPQ5VYV7 408 aa14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 RNF111Q6ZNA4 994 aa14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 NECAB2Q7Z6G3 386 aa14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 ZNF467Q7Z7K2 595 aaPredicted RBP14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 ASB12Q8WXK4 309 aa14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 RORBQ92753 470 aa14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 MSANTD3Q96H12 275 aa14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 SLC39A13Q96H72 371 aa14.46□□□□□ -0.1
SYNGAP1-203ENST00000428982 TUBA1CQ9BQE3 449 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms