RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 TCAF1Q9Y4C2 921 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 DCXO43602 365 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 SERPINB3P29508 390 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 POLD2P49005 469 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 ATXN1P54253 815 aaKnown RBP13.9□□□□□ -0.18
RPL28-202ENST00000426763 VAC14Q08AM6 782 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 CENPTQ96BT3 561 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 IMP3Q9NV31 184 aaKnown RBP13.9□□□□□ -0.18
RPL28-202ENST00000426763 RASSF9O75901 435 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 WDR47O94967 919 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 TBX18O95935 607 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 VHLP40337 213 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 GABRB2P47870 512 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 GNA13Q14344 377 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 RCN1Q15293 331 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 ZNF621Q6ZSS3 439 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 ZNF461Q8TAF7 563 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 FIG4Q92562 907 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 HAPLN1P10915 354 aaPredicted RBP13.9□□□□□ -0.18
RPL28-202ENST00000426763 ATP6V1B2P21281 511 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 LRPAP1P30533 357 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 RPL3P39023 403 aaKnown RBP13.9□□□□□ -0.18
RPL28-202ENST00000426763 SNX32Q86XE0 403 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 CELF5Q8N6W0 485 aaKnown RBP13.9□□□□□ -0.18
RPL28-202ENST00000426763 SPATA22Q8NHS9 363 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 ACDQ96AP0 544 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 SAMD11Q96NU1 681 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 RAD9AQ99638 391 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 OSBPL2Q9H1P3 480 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 HSD3B7Q9H2F3 369 aa13.9□□□□□ -0.18
RPL28-202ENST00000426763 IDSP22304 550 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 SLC16A1P53985 500 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 FAM98BQ52LJ0 330 aaKnown RBP13.89□□□□□ -0.19
RPL28-202ENST00000426763 DNAJC14Q6Y2X3 702 aaPredicted RBP13.89□□□□□ -0.19
RPL28-202ENST00000426763 PRR23CQ6ZRP0 262 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 ZFP28Q8NHY6 868 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 FFAR3O14843 346 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 GPR42O15529 346 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 EPN2O95208 641 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 PABPC1P11940 636 aaKnown RBP13.89□□□□□ -0.19
RPL28-202ENST00000426763 HK2P52789 917 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 INCA1Q0VD86 236 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 HECTD2Q5U5R9 776 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 OR10G6Q8NH81 332 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 ELAC1Q9H777 363 aaKnown RBP13.89□□□□□ -0.19
RPL28-202ENST00000426763 LRRC4CQ9HCJ2 640 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 CHRAC1Q9NRG0 131 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 SALL4Q9UJQ4 1053 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 PIRO00625 290 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 CSKP41240 450 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 MAGEA11P43364 429 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 CCR3P51677 355 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 CA9Q16790 459 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 TTMPQ5BVD1 217 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 TCAIMQ8N3R3 496 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 WDR48Q8TAF3 677 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 CLP1Q92989 425 aaKnown RBP13.89□□□□□ -0.19
RPL28-202ENST00000426763 IGSF21Q96ID5 467 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 RPL10LQ96L21 214 aaKnown RBP13.89□□□□□ -0.19
RPL28-202ENST00000426763 CCSER2Q9H7U1 834 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 RABGEF1Q9UJ41 708 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 INSL5Q9Y5Q6 135 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 H3BM21 787 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 PCCBP05166 539 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 DRICH1Q6PGQ1 229 aaPredicted RBP13.89□□□□□ -0.19
RPL28-202ENST00000426763 CDK20Q8IZL9 346 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 EFCAB3Q8N7B9 438 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 PHC3Q8NDX5 983 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 WRAP53Q9BUR4 548 aaKnown RBP13.89□□□□□ -0.19
RPL28-202ENST00000426763 ADAMTS10Q9H324 1103 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 RAP2CQ9Y3L5 183 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 SASH3O75995 380 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 PRAMEF1O95521 474 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 TRMT5Q32P41 509 aaKnown RBP13.89□□□□□ -0.19
RPL28-202ENST00000426763 SH3PXD2AQ5TCZ1 1133 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 SPATA6LQ8N4H0 392 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 ZBTB2Q8N680 514 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 CDYL2Q8N8U2 506 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 SPPL2AQ8TCT8 520 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 SLC35F5Q8WV83 523 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 KLHL32Q96NJ5 620 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 PRRG3Q9BZD7 231 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 GKN1Q9NS71 199 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.89□□□□□ -0.19
RPL28-202ENST00000426763 ADPRHL2Q9NX46 363 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 DTLQ9NZJ0 730 aa13.89□□□□□ -0.19
RPL28-202ENST00000426763 MTMR11A4FU01 709 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 PIAS1O75925 651 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 IQCF3P0C7M6 154 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 MYBL2P10244 700 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 ATP6V1C1P21283 382 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 GUCA1AP43080 201 aaPredicted RBP13.88□□□□□ -0.19
RPL28-202ENST00000426763 RXRGP48443 463 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 TRIM32Q13049 653 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 SNX30Q5VWJ9 437 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 GALNT13Q8IUC8 556 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 INPP5DQ92835 1189 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 TEKT5Q96M29 485 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 SIX4Q9UIU6 781 aa13.88□□□□□ -0.19
RPL28-202ENST00000426763 MAP2K7O14733 419 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms