RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 TRIB3Q96RU7 358 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 KRT12Q99456 494 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 NAP1L3Q99457 506 aaPredicted RBP5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 VAT1Q99536 393 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 OMDQ99983 421 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 APOL2Q9BQE5 337 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 TRIM51Q9BSJ1 452 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 FICDQ9BVA6 458 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 TDRD1Q9BXT4 1180 aaKnown RBP5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 HDAC8Q9BY41 377 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 C6orf106Q9H6K1 298 aaPredicted RBP5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 ATP13A3Q9H7F0 1226 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 FBRSQ9HAH7 460 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 PCDH12Q9NPG4 1184 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 FAM86C1Q9NVL1 165 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 ZSCAN32Q9NX65 697 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 WSB2Q9NYS7 404 aaPredicted RBP5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 SLCO1B1Q9Y6L6 691 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 R4GN57 208 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 ATG2BQ96BY7 2078 aa5.75□□□□□ -1.49
HERPUD2-204ENST00000426180 CKAP5Q14008 2032 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 NUP205Q92621 2012 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 GOLGA6L10A0A0M3HER8 536 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 LOC285095A0A1B0GVY8 99 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 TCRBV7S3A2A0A539 114 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 PRR23AA6NEV1 266 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 NPIPB15A6NHN6 443 aaPredicted RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 FAM47DPA6NHR8 397 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 UPK3BL1B0FP48 263 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 UPK3BL2E5RIL1 263 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 KIF2AO00139 706 aaPredicted RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 AREL1O15033 823 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 TTI1O43156 1089 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 PLRG1O43660 514 aaKnown RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 OPHN1O60890 802 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 LILRB5O75023 590 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 USP12O75317 370 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 RPP40O75818 363 aaKnown RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 STK10O94804 968 aaKnown RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 TUBB4AP04350 444 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 SERPINF2P08697 491 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 ALPIP09923 528 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 ATXN1LP0C7T5 689 aaKnown RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 PIRTP0C851 137 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 GM2AP17900 193 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 LHCGRP22888 699 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 CES1P23141 567 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 CD6P30203 668 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 STIP1P31948 543 aaKnown RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 ADRA1AP35348 466 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 HNF1BP35680 557 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 GRIA1P42261 906 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 PAFAH1B1P43034 410 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 MAPK8P45983 427 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 FNTAP49354 379 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 NEK3P51956 506 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 ADPRHP54922 357 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 PCBP4P57723 403 aaKnown RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 CDK18Q07002 472 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 FGL2Q14314 439 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 LPAL2Q16609 132 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 CDKN3Q16667 212 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 UGP2Q16851 508 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 WHAMMP3Q1A5X7 153 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 PARP6Q2NL67 630 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 P3H1Q32P28 736 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 ZNF528Q3MIS6 628 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 TTC31Q49AM3 519 aaPredicted RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 USP39Q53GS9 565 aaKnown RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 RALGPS1Q5JS13 557 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 SIRPB2Q5JXA9 342 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 ARMC12Q5T9G4 340 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 ANKRD22Q5VYY1 191 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 SEL1L3Q68CR1 1132 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 KCTD11Q693B1 232 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 ITPRIPL1Q6GPH6 555 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 DENND5AQ6IQ26 1287 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 FBXL19Q6PCT2 694 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 KDM7AQ6ZMT4 941 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 RFLNAQ6ZTI6 216 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 USP30Q70CQ3 517 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 ZNF572Q7Z3I7 529 aaPredicted RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 TTC7BQ86TV6 843 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 TSPAN33Q86UF1 283 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 KBTBD6Q86V97 674 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 SLC41A1Q8IVJ1 513 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 KLHDC8BQ8IXV7 354 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 TMEFF1Q8IYR6 380 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 SLC25A41Q8N5S1 370 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 CCDC89Q8N998 374 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 NOA1Q8NC60 698 aaKnown RBP5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 ZBTB44Q8NCP5 570 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 SPATA4Q8NEY3 305 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 IPMKQ8NFU5 416 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 OR14C36Q8NHC7 312 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 KIF18AQ8NI77 898 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 HCAR2Q8TDS4 363 aa5.74□□□□□ -1.49
HERPUD2-204ENST00000426180 GAB3Q8WWW8 586 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms