RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CA5AP35218 305 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 PPARDQ03181 441 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 SLC29A2Q14542 456 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 PALM2Q8IXS6 379 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 KDM1BQ8NB78 822 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 SIPA1Q96FS4 1042 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 TUBGCP5Q96RT8 1024 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 EBNA1BP2Q99848 306 aaKnown RBP13.47□□□□□ -0.25
PRPF39-202ENST00000424478 DYRK4Q9NR20 520 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 SAMD15Q9P1V8 674 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 EBF1Q9UH73 591 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 MRPS17Q9Y2R5 130 aaKnown RBP13.47□□□□□ -0.25
PRPF39-202ENST00000424478 FOXO6A8MYZ6 492 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 E7ESA3 106 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 DCXO43602 365 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 UGT1A9O60656 530 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 HSD17B3P37058 310 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 MAPK8P45983 427 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 CDKN1CP49918 316 aaPredicted RBP13.47□□□□□ -0.25
PRPF39-202ENST00000424478 TAS2R38P59533 333 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 DMWDQ09019 674 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 C3orf62Q6ZUJ4 267 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 ZNF641Q96N77 438 aaPredicted RBP13.47□□□□□ -0.25
PRPF39-202ENST00000424478 OMDQ99983 421 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 TXLNGYQ9BZA5 131 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 UGT1A7Q9HAW7 530 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 UGT1A10Q9HAW8 530 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 UGT1A8Q9HAW9 530 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 ARFGAP3Q9NP61 516 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 UPK3BL1B0FP48 263 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 UPK3BL2E5RIL1 263 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 PSMD3O43242 534 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 MMP20O60882 483 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 CES1P23141 567 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 EOGTQ5NDL2 527 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 PIP5KL1Q5T9C9 394 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 ZNF776Q68DI1 518 aaPredicted RBP13.46□□□□□ -0.25
PRPF39-202ENST00000424478 HSD11B1LQ7Z5J1 315 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 PELI3Q8N2H9 469 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 EDAQ92838 391 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 TBATAQ96M53 351 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 ARNT2Q9HBZ2 717 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 TCAF1Q9Y4C2 921 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 CCDC151A5D8V7 595 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 ALOX15BO15296 676 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 RNASEH1O60930 286 aaKnown RBP13.46□□□□□ -0.25
PRPF39-202ENST00000424478 ZNF189O75820 626 aaPredicted RBP13.46□□□□□ -0.25
PRPF39-202ENST00000424478 VAPBO95292 243 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 DNTTP04053 509 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 ACSL1P33121 698 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 ETV3P41162 512 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 GRIA4P48058 902 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
PRPF39-202ENST00000424478 PGGT1BP53609 377 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 SIGLEC14Q08ET2 396 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 SKIDA1Q1XH10 827 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 AGBL4Q5VU57 503 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 ERN2Q76MJ5 926 aaKnown RBP13.46□□□□□ -0.25
PRPF39-202ENST00000424478 OR13J1Q8NGT2 312 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 OR14C36Q8NHC7 312 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 SCAMP4Q969E2 229 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 FUBP1Q96AE4 644 aaKnown RBP13.46□□□□□ -0.25
PRPF39-202ENST00000424478 CCDC97Q96F63 343 aaPredicted RBP13.46□□□□□ -0.25
PRPF39-202ENST00000424478 SCRN2Q96FV2 425 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 IL22Q9GZX6 179 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 SMYD2Q9NRG4 433 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 ZNF446Q9NWS9 450 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 FKBPLQ9UIM3 349 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 CYP8B1Q9UNU6 501 aa13.46□□□□□ -0.25
PRPF39-202ENST00000424478 CAPN8A6NHC0 703 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 CXorf49A8MYA2 514 aaPredicted RBP13.46□□□□□ -0.26
PRPF39-202ENST00000424478 C1QTNF3-AMACRE9PGA6 284 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 PPFIA2O75334 1257 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 FAM155BO75949 473 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 EPOP01588 193 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 ITGB7P26010 798 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 SLCO1A2P46721 670 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 PTSQ03393 145 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 CRYMQ14894 314 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 SEL1L3Q68CR1 1132 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 PTAR1Q7Z6K3 402 aaPredicted RBP13.46□□□□□ -0.26
PRPF39-202ENST00000424478 PLPP6Q8IY26 295 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 TMIEQ8NEW7 156 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 PPHLN1Q8NEY8 458 aaKnown RBP13.46□□□□□ -0.26
PRPF39-202ENST00000424478 AGAP2Q99490 1192 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 PHTF1Q9UMS5 762 aa13.46□□□□□ -0.26
PRPF39-202ENST00000424478 ARIH1Q9Y4X5 557 aaPredicted RBP13.46□□□□□ -0.26
PRPF39-202ENST00000424478 RIPK2O43353 540 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 PCDH8O95206 1070 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 MLNP12872 115 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 CA4P22748 312 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 ARNTP27540 789 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 RALGDSQ12967 914 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 LRRC32Q14392 662 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 BRD3Q15059 726 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 CDKN3Q16667 212 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 ANKRD20A4Q4UJ75 823 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 FAM151BQ6UXP7 276 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 Q6ZVL8 140 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 DSG4Q86SJ6 1040 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms