RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 LYSMD3Q7Z3D4 306 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 PATL1Q86TB9 770 aaKnown RBP15.27■□□□□ 0.03
C9orf3-204ENST00000424143 TBC1D21Q8IYX1 336 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 PDPRQ8NCN5 879 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 ZMIZ2Q8NF64 920 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 PPWD1Q96BP3 646 aaKnown RBP15.27■□□□□ 0.03
C9orf3-204ENST00000424143 C19orf60Q96EN9 201 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 PPP1R10Q96QC0 940 aaKnown RBP15.27■□□□□ 0.03
C9orf3-204ENST00000424143 NPLQ9BXD5 320 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-204ENST00000424143 SLC25A51Q9H1U9 297 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 SLC38A7Q9NVC3 462 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 SMOXQ9NWM0 555 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 MAP10Q9P2G4 905 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 VWA7Q9Y334 891 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 ZNF839A8K0R7 811 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 PLOD2O00469 737 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 NME4O00746 187 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 TIPRLO75663 272 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 F7P08709 466 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-204ENST00000424143 KCNA5P22460 613 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 PAX3P23760 479 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 SUOXP51687 545 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 HERVK_113P63132 956 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 EN1Q05925 392 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-204ENST00000424143 RALGDSQ12967 914 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 TUBA3CQ13748 450 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 ZNF460Q14592 562 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 UNC50Q53HI1 259 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 TBCELQ5QJ74 424 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 KIAA0319Q5VV43 1072 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 WSCD1Q658N2 575 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 OGFOD2Q6N063 350 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 KDELC1Q6UW63 502 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 SLC15A3Q8IY34 581 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 ADGRG5Q8IZF4 528 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 GPC2Q8N158 579 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 MIER2Q8N344 545 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 IPMKQ8NFU5 416 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 C12orf43Q96C57 262 aaKnown RBP15.26■□□□□ 0.03
C9orf3-204ENST00000424143 SMARCD1Q96GM5 515 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 MRGPRX2Q96LB1 330 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 ERVK-6Q9BXR3 956 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 MFSD1Q9H3U5 465 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 ACSS2Q9NR19 701 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 SDR39U1Q9NRG7 319 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-204ENST00000424143 TBC1D23Q9NUY8 699 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-204ENST00000424143 UBP1Q9NZI7 540 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 RIMKLBQ9ULI2 386 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 SH3GLB1Q9Y371 365 aa15.26■□□□□ 0.03
C9orf3-204ENST00000424143 IQCA1LA6NCM1 817 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 ACOX3O15254 700 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 INHBBP09529 407 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 CKMT2P17540 419 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 AKAP5P24588 427 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 CAPGP40121 348 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 GRIA3P42263 894 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 CD97P48960 835 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 EEFSECP57772 596 aaKnown RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 HECTD2Q5U5R9 776 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 IQSEC1Q6DN90 963 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 SPATA19Q7Z5L4 167 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 RETREG3Q86VR2 466 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 CLVS1Q8IUQ0 354 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 PHYKPLQ8IUZ5 450 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 CBR4Q8N4T8 237 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 SPATA22Q8NHS9 363 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 RHEBL1Q8TAI7 183 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 ZC3H15Q8WU90 426 aaKnown RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 OLFM1Q99784 485 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 TDRD1Q9BXT4 1180 aaKnown RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 CXorf21Q9HAI6 301 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 TNFRSF12AQ9NP84 129 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 SLC52A3Q9NQ40 469 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 CHST12Q9NRB3 414 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 PCDHA9Q9Y5H5 950 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 SLC30A1Q9Y6M5 507 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 A0A0J9YYE9 177 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 NEMP2A6NFY4 417 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 FXYD1O00168 92 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 UBFD1O14562 309 aaKnown RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 USP17L7P0C7H9 530 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 HLCSP50747 726 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 ATXN3P54252 364 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 BTG3Q14201 252 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 CBX2Q14781 532 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 MOGQ16653 247 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 PPP1R3AQ16821 1122 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 AASDHQ4L235 1098 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 ARTNQ5T4W7 220 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 ELMSAN1Q6PJG2 1045 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 CYP2R1Q6VVX0 501 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 EFL1Q7Z2Z2 1120 aaKnown RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 ISCA2Q86U28 154 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 TRIM74Q86UV6 250 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 TRIM73Q86UV7 250 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 EPHX4Q8IUS5 362 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 GPR150Q8NGU9 434 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 GRIN3AQ8TCU5 1115 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 SENP8Q96LD8 212 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms