RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 RASSF3Q86WH2 238 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 CCDC25Q86WR0 208 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 RELL1Q8IUW5 271 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 ZBED8Q8IZ13 594 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 CBARPQ8N350 705 aaPredicted RBP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 TTC30BQ8N4P2 665 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 GANCQ8TET4 914 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 PBXIP1Q96AQ6 731 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 EID2BQ96D98 161 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 LRRC39Q96DD0 335 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 EBNA1BP2Q99848 306 aaKnown RBP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 WDR83Q9BRX9 315 aaKnown RBP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 KIFC1Q9BW19 673 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 TRABDQ9H4I3 376 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 MRM3Q9HC36 420 aaKnown RBP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 CHRAC1Q9NRG0 131 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 BCCIPQ9P287 314 aaKnown RBP eCLIP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 SOX13Q9UN79 622 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 NCKAP1Q9Y2A7 1128 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 ZNF711Q9Y462 761 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 TCAF1Q9Y4C2 921 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 KCTD3Q9Y597 815 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 FADS3Q9Y5Q0 445 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 MYLKQ15746 1914 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 HEATR9A2RTY3 570 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 K7ESF4 209 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 SLC7A4O43246 635 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 AP1G1O43747 822 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 APBB3O95704 486 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 CRTAMO95727 393 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 LHCGRP22888 699 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 MMP12P39900 470 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 TPMTP51580 245 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 TAS2R38P59533 333 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 PTSQ03393 145 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 LAMB3Q13751 1172 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 SLMAPQ14BN4 828 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 FASTKD3Q14CZ7 662 aaKnown RBP12.51□□□□□ -0.41
TMEM53-206ENST00000420706 BRD3Q15059 726 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 CCDC38Q502W7 563 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 ARMC3Q5W041 872 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 LYSMD3Q7Z3D4 306 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 GLT6D1Q7Z4J2 308 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 ANKMY2Q8IV38 441 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 FBXO36Q8NEA4 188 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 PPHLN1Q8NEY8 458 aaKnown RBP12.51□□□□□ -0.41
TMEM53-206ENST00000420706 AENQ8WTP8 325 aaKnown RBP12.51□□□□□ -0.41
TMEM53-206ENST00000420706 PYROXD1Q8WU10 500 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 PTCD2Q8WV60 388 aaKnown RBP12.51□□□□□ -0.41
TMEM53-206ENST00000420706 STAMBPL1Q96FJ0 436 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 TXLNGYQ9BZA5 131 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 GPR63Q9BZJ6 419 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 ZFYVE1Q9HBF4 777 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 CD93Q9NPY3 652 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 SPATA6Q9NWH7 488 aaPredicted RBP12.51□□□□□ -0.41
TMEM53-206ENST00000420706 USP36Q9P275 1121 aaKnown RBP12.51□□□□□ -0.41
TMEM53-206ENST00000420706 GGT7Q9UJ14 662 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 RIMKLBQ9ULI2 386 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 FZD4Q9ULV1 537 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 CHMP2BQ9UQN3 213 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 ARL5AQ9Y689 179 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 MAD1L1Q9Y6D9 718 aa12.51□□□□□ -0.41
TMEM53-206ENST00000420706 C1orf232A0A0U1RR37 186 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 FAM237BA0A1B0GVD1 139 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 MROH6A6NGR9 719 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 C2orf81A6NN90 581 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 TSPAN6O43657 245 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 PLRG1O43660 514 aaKnown RBP12.5□□□□□ -0.41
TMEM53-206ENST00000420706 BUD23O43709 281 aaKnown RBP12.5□□□□□ -0.41
TMEM53-206ENST00000420706 IGLV3-19P01714 112 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 ZNF30P17039 623 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 LPOP22079 712 aaPredicted RBP12.5□□□□□ -0.41
TMEM53-206ENST00000420706 PSMA3P25788 255 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 NMBRP28336 390 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 HMGCLP35914 325 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 SEPT6Q14141 434 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 ARHGEF7Q14155 803 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 PTPRCAPQ14761 206 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 CNGA3Q16281 694 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 TSTD2Q5T7W7 516 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 LRRC66Q68CR7 880 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 CASC4Q6P4E1 433 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 CES3Q6UWW8 571 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 LIPIQ6XZB0 460 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 NLRP9Q7RTR0 991 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 TMEM135Q86UB9 458 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 CCNJLQ8IV13 435 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 TMEM105Q8N8V8 129 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 OR14C36Q8NHC7 312 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 STYXQ8WUJ0 223 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 MFSD3Q96ES6 412 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 C9orf72Q96LT7 481 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 ZNF778Q96MU6 729 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 FCRL3Q96P31 734 aaPredicted RBP12.5□□□□□ -0.41
TMEM53-206ENST00000420706 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
TMEM53-206ENST00000420706 NAT9Q9BTE0 207 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 CDC42EP4Q9H3Q1 356 aaKnown RBP12.5□□□□□ -0.41
TMEM53-206ENST00000420706 IL17CQ9P0M4 197 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 SAMD15Q9P1V8 674 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms