RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 NTRK3Q16288 839 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 EARS2Q5JPH6 523 aaKnown RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 FBXO42Q6P3S6 717 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 TMC5Q6UXY8 1006 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 TRNT1Q96Q11 434 aaKnown RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 DPEP2Q9H4A9 486 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 TCEA3O75764 348 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 CHRNGP07510 517 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 GRIA3P42263 894 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 NDUFA9Q16795 377 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 MINDY4Q4G0A6 757 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 PRR23BQ6ZRT6 265 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 LRRC49Q8IUZ0 686 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 PCDH20Q8N6Y1 951 aaKnown RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 ADCY4Q8NFM4 1077 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 EEF1AKMT1Q8WVE0 214 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 DDX3XO00571 662 aaKnown RBP eCLIP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 TNFAIP8O95379 198 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 PDX1P52945 283 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 SMU1Q2TAY7 513 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 HEXDCQ8WVB3 486 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 ITCHQ96J02 903 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 GPER1Q99527 375 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 COPS8Q99627 209 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 SEMA3GQ9NS98 782 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 ABI3Q9P2A4 366 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 SYNPO2Q9UMS6 1093 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 MRPS17Q9Y2R5 130 aaKnown RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 RFXANKO14593 260 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 HNRNPH1P31943 449 aaKnown RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 NAGLUP54802 743 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 ST3GAL1Q11201 340 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 ATP1A4Q13733 1029 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 AADACL2Q6P093 401 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 C8orf59Q8N0T1 100 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 ZCCHC7Q8N3Z6 543 aaKnown RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 LRRN4Q8WUT4 740 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 PRCCQ92733 491 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 CAVIN3Q969G5 261 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 PPCDCQ96CD2 204 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 SLC38A3Q99624 504 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 MRPL45Q9BRJ2 306 aaKnown RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 C3orf14Q9HBI5 128 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 CMTM6Q9NX76 183 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 COL5A2P05997 1499 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 SPATA31C2B4DYI2 1134 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 ASNA1O43681 348 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 STBD1O95210 358 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 ALPPL2P10696 532 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 STAT5AP42229 794 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 MRPS5P82675 430 aaKnown RBP11.23□□□□□ -0.61
PTCH1-205ENST00000418258 PPP3CAQ08209 521 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 DDR1Q08345 913 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 GALNT13Q8IUC8 556 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 CFAP206Q8IYR0 622 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 UBR7Q8N806 425 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 SLAIN1Q8ND83 568 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 PJA1Q8NG27 643 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 OR52E6Q96RD3 313 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 SLC35C2Q9NQQ7 365 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 OSER1Q9NX31 292 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 YDJCA8MPS7 323 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 PSMD11O00231 422 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 FFAR2O15552 330 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 MATKP42679 507 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 MRPS22P82650 360 aaKnown RBP11.23□□□□□ -0.61
PTCH1-205ENST00000418258 GRSF1Q12849 480 aaKnown RBP eCLIP11.23□□□□□ -0.61
PTCH1-205ENST00000418258 SQLEQ14534 574 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 SUZ12Q15022 739 aaKnown RBP11.23□□□□□ -0.61
PTCH1-205ENST00000418258 TIMM50Q3ZCQ8 353 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 FNBP1LQ5T0N5 605 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 C9orf64Q5T6V5 341 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 AIF1LQ9BQI0 150 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 ZMYND8Q9ULU4 1186 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-205ENST00000418258 CDH5P33151 784 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-205ENST00000418258 EPS8Q12929 822 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 GRB14Q14449 540 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 TAF5Q15542 800 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 TXNDC11Q6PKC3 985 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 CHST9Q7L1S5 443 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 OR10H5Q8NGA6 315 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 MCMBPQ9BTE3 642 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 CRISPLD1Q9H336 500 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 HMG20AQ9NP66 347 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 CNGB3Q9NQW8 809 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 EXD2Q9NVH0 621 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 LYNP07948 512 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 GNSP15586 552 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 NT5EP21589 574 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 MYL9P24844 172 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 TAF10Q12962 218 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 CTBP1Q13363 440 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 CDKAL1Q5VV42 579 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 BPIFB6Q8NFQ5 453 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 DSN1Q9H410 356 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 KIF1AQ12756 1690 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 XKRYO14609 159 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 MTRF1O75570 445 aaKnown RBP11.23□□□□□ -0.61
PTCH1-205ENST00000418258 BRCC3P46736 316 aa11.23□□□□□ -0.61
PTCH1-205ENST00000418258 CASP5P51878 434 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms