RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 HDCP19113 662 aa11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 FGFR3P22607 806 aa11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 YWHAQP27348 245 aa11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SLC7A2P52569 658 aa11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ILF2Q12905 390 aaKnown RBP11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PFKFB4Q16877 469 aa11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ARMC3Q5W041 872 aa11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ANKRD49Q8WVL7 239 aa11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 HIC2Q96JB3 615 aa11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 KLHL32Q96NJ5 620 aa11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MRPS26Q9BYN8 205 aaKnown RBP11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MTF2Q9Y483 593 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 COMMD10Q9Y6G5 202 aa11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TLL2Q9Y6L7 1015 aa11.73□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RNASEH2AO75792 299 aaKnown RBP11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 HOXC8P31273 242 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RHDQ02161 417 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SIRPB2Q5JXA9 342 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PIM3Q86V86 326 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 AHI1Q8N157 1196 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 OR9I1Q8NGQ6 314 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TOP1MTQ969P6 601 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 BTN2A3PQ96KV6 586 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RANBP9Q96S59 729 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MARCH2Q9P0N8 246 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PCDHB8Q9UN66 801 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 NEU3Q9UQ49 428 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PCDHGA7Q9Y5G6 932 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 AK5Q9Y6K8 562 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SLC12A8A0AV02 714 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SUPT3HB4E1H0 165 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 CD3EAPO15446 510 aaKnown RBP11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SUPT3HO75486 399 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 CNTN5O94779 1100 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SLC26A3P40879 764 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PGFP49763 221 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 GALNT1Q10472 559 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RBM44Q6ZP01 1051 aaKnown RBP11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ZBTB49Q6ZSB9 765 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 HERC6Q8IVU3 1022 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 LILRA2Q8N149 483 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RMDN1Q96DB5 314 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 GMIPQ9P107 970 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PCDHB5Q9Y5E4 795 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PRSS51A0A1B0GVH4 220 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ACOT8O14734 319 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MGEA5O60502 916 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RHOBTB1O94844 696 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SERPINF2P08697 491 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ARSDP51689 593 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 HERVK_113P63132 956 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 INPP5AQ14642 412 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ALFQ53S48 1182 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PELI3Q8N2H9 469 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MIER2Q8N344 545 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 OR13J1Q8NGT2 312 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 LRTOMTQ8WZ04 291 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 UBXN10Q96LJ8 280 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 CCT7Q99832 543 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SPON2Q9BUD6 331 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ERVK-6Q9BXR3 956 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PFDN4Q9NQP4 134 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 GID8Q9NWU2 228 aa11.72□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ZNF638Q14966 1978 aaKnown RBP11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PFDN6O15212 129 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 CHEK2O96017 543 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PIRTP0C851 137 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 HLA-DPA1P20036 260 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 IL10P22301 178 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 GRK4P32298 578 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 GRIA3P42263 894 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 CDKN2DP55273 166 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TRAP1Q12931 704 aaKnown RBP11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ADRM1Q16186 407 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MS4A13Q5J8X5 152 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 ZNF678Q5SXM1 525 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MSANTD2Q6P1R3 559 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 AMIGO2Q86SJ2 522 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 PAF1Q8N7H5 531 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 GPR152Q8TDT2 470 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MPP4Q96JB8 637 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TMEM79Q9BSE2 394 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SYTL2Q9HCH5 934 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 CATSPERZQ9NTU4 200 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 SCML2Q9UQR0 700 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 FNDC3AQ9Y2H6 1198 aaKnown RBP11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 A0A0J9YYE9 177 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 F8W810 466 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TNFRSF10BO14763 440 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 AZIN1O14977 448 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 S1PR4O95977 384 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 FGF1P05230 155 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 NRG1Q02297 640 aaPredicted RBP11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 CHSY3Q70JA7 882 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 DNAJC1Q96KC8 554 aaKnown RBP11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 CAAP1Q9H8G2 361 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 FBRSL1Q9HCM7 1045 aaKnown RBP11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 TMEM248Q9NWD8 314 aa11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 MARCH4Q9P2E8 410 aaPredicted RBP11.71□□□□□ -0.53
CSPG4P3Y-201ENST00000418188 RNF112Q9ULX5 631 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms