RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SRPK1Q96SB4 655 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 KLF6Q99612 283 aaPredicted RBP23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 FSCN3Q9NQT6 498 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 UBP1Q9NZI7 540 aa23.16■■□□□ 1.3
SMARCB1-205ENST00000417137 GOLGA6CA6NDK9 693 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 GOLGA6BA6NDN3 693 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 CAPN8A6NHC0 703 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 NPIPB15A6NHN6 443 aaPredicted RBP23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 A6NNZ2 444 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 DFNA5O60443 496 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 GCATO75600 419 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 NDST3O95803 873 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 CER1O95813 267 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 WNT1P04628 370 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 ALPIP09923 528 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 GOLGA6DP0CG33 693 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 ZNF30P17039 623 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 ACTN2P35609 894 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 LIMK1P53667 647 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 WNT3AP56704 352 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 ACOX1Q15067 660 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 QPCTQ16769 361 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 KIF19Q2TAC6 998 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 DRICH1Q6PGQ1 229 aaPredicted RBP23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 RASGEF1CQ8N431 466 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 CCDC110Q8TBZ0 833 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 TRIB3Q96RU7 358 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 LYSMD1Q96S90 227 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 OSBPL9Q96SU4 736 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 GDF3Q9NR23 364 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 GOLGA6AQ9NYA3 693 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 TTC7AQ9ULT0 858 aaPredicted RBP23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 SNX12Q9UMY4 172 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 COQ6Q9Y2Z9 468 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 SNX11Q9Y5W9 270 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 RALGAPA1Q6GYQ0 2036 aa23.15■■□□□ 1.3
SMARCB1-205ENST00000417137 ZNF292O60281 2723 aa23.14■■□□□ 1.3
SMARCB1-205ENST00000417137 CES2O00748 559 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 TOR1BO14657 336 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 RAD51BO15315 384 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 GDF9O60383 454 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 RECQL5O94762 991 aaPredicted RBP23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 THEGLP0DJG4 465 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 CTSKP43235 329 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 RABIFP47224 123 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 CLDN2P57739 230 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 SNX1Q13596 522 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 OASLQ15646 514 aaKnown RBP23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 CNGA3Q16281 694 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 PARP6Q2NL67 630 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 STPG1Q5TH74 334 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 KDELC1Q6UW63 502 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 LAYNQ6UX15 382 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 ABI3BPQ7Z7G0 1075 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 MINDY1Q8N5J2 469 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 FSD1LQ9BXM9 530 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 RXFP3Q9NSD7 469 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 DRG1Q9Y295 367 aaKnown RBP23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 CA5BQ9Y2D0 317 aa23.14■■□□□ 1.29
SMARCB1-205ENST00000417137 F5H423 210 aaPredicted RBP23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 ITGAVP06756 1048 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 TCP1P17987 556 aaKnown RBP23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 BNC1Q01954 994 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 GALNT3Q14435 633 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 SIX1Q15475 284 aaPredicted RBP23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 HLA-BQ31612 363 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 P3H1Q32P28 736 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 DENND2CQ68D51 928 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 CRTC1Q6UUV9 634 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 KYAT3Q6YP21 454 aaKnown RBP23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 GCNT7Q6ZNI0 430 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 Q6ZSR6 202 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 RAVER1Q8IY67 606 aaKnown RBP23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 CBARPQ8N350 705 aaPredicted RBP23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 TP53I13Q8NBR0 393 aaPredicted RBP23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 CCHCR1Q8TD31 782 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 RTP4Q96DX8 246 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 OXNAD1Q96HP4 312 aaPredicted RBP23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 BMFQ96LC9 184 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 COQ10AQ96MF6 247 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 GAREM1Q9H706 876 aa23.13■■□□□ 1.29
SMARCB1-205ENST00000417137 LOC285095A0A1B0GVY8 99 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 C4orf47A7E2U8 309 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 H0Y8X5 98 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 CDX4O14627 284 aaPredicted RBP23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 LHCGRP22888 699 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 PSMB4P28070 264 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 NXPH1P58417 271 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 WSCD2Q2TBF2 565 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 LRRC66Q68CR7 880 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 PTAR1Q7Z6K3 402 aaPredicted RBP23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 TSPAN33Q86UF1 283 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 OXR1Q8N573 874 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 IPMKQ8NFU5 416 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 MRGPRX2Q96LB1 330 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 NAPGQ99747 312 aaPredicted RBP23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 ERVMER34-1Q9H9K5 563 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 MAGEE1Q9HCI5 957 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 DNAAF2Q9NVR5 837 aaKnown RBP23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 CDV3Q9UKY7 258 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms