RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 TTC9Q92623 222 aa14.48□□□□□ -0.09
PAF1-202ENST00000416728 PSKH2Q96QS6 385 aa14.48□□□□□ -0.09
PAF1-202ENST00000416728 TRIM7Q9C029 511 aa14.48□□□□□ -0.09
PAF1-202ENST00000416728 HAUS4Q9H6D7 363 aa14.48□□□□□ -0.09
PAF1-202ENST00000416728 WDR26Q9H7D7 661 aa14.48□□□□□ -0.09
PAF1-202ENST00000416728 ZWILCHQ9H900 591 aa14.48□□□□□ -0.09
PAF1-202ENST00000416728 MRPL40Q9NQ50 206 aaKnown RBP14.48□□□□□ -0.09
PAF1-202ENST00000416728 CNOT8Q9UFF9 292 aaKnown RBP14.48□□□□□ -0.09
PAF1-202ENST00000416728 PCDHGA7Q9Y5G6 932 aa14.48□□□□□ -0.09
PAF1-202ENST00000416728 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 A8MX80 341 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 B4DGG1 531 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 PDE2AO00408 941 aaPredicted RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 LRCH4O75427 683 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 FTLP02792 175 aaPredicted RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 HOXC4P09017 264 aaPredicted RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 JMJD7P0C870 316 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 GZMAP12544 262 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 GLB1P16278 677 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 SLC5A2P31639 672 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 TRIM23P36406 574 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 DPYSQ14117 519 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 ZNF235Q14590 738 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 TSR1Q2NL82 804 aaKnown RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 C14orf28Q4W4Y0 310 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 CERCAMQ5T4B2 595 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 CCDC183Q5T5S1 534 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 OGFOD3Q6PK18 319 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 CYP4V2Q6ZWL3 525 aaPredicted RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 ZNF653Q96CK0 615 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 ZNF599Q96NL3 588 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 CCNL2Q96S94 520 aaPredicted RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 NAT10Q9H0A0 1025 aaKnown RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 TMEM168Q9H0V1 697 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 DPEP2Q9H4A9 486 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 CYP4F12Q9HCS2 524 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 RTN4Q9NQC3 1192 aaKnown RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 CWC15Q9P013 229 aaKnown RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 B4GALT6Q9UBX8 382 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 MOSPD1Q9UJG1 213 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 APPL1Q9UKG1 709 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 SCINQ9Y6U3 715 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 GCN1Q92616 2671 aaKnown RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 A0A1W2PQ67 120 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 H3BRJ5 948 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 NOBOXO60393 691 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 HGFP14210 728 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 PNLIPP16233 465 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 GM2AP17900 193 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 NFKBIAP25963 317 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 TYRO3Q06418 890 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 SLC10A7Q0GE19 358 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 ARHGEF7Q14155 803 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 LY6DQ14210 128 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 FILIP1LQ4L180 1135 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 KIAA1614Q5VZ46 1190 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 PNCKQ6P2M8 343 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 ZNF571Q7Z3V5 609 aaPredicted RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 TP53INP2Q8IXH6 220 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 PDCD6IPQ8WUM4 868 aaKnown RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 TRIM11Q96F44 468 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 LGR4Q9BXB1 951 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 LRIT1Q9P2V4 623 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 PISDQ9UG56 409 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 ATXN7L1Q9ULK2 861 aaPredicted RBP14.47□□□□□ -0.09
PAF1-202ENST00000416728 RNF215Q9Y6U7 377 aa14.47□□□□□ -0.09
PAF1-202ENST00000416728 MGAQ8IWI9 3026 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 PRSS38A1L453 326 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 SOCS5O75159 536 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 MBD3O95983 291 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 MYCLP1P12525 358 aaPredicted RBP14.46□□□□□ -0.1
PAF1-202ENST00000416728 PCK1P35558 622 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 HSPA9P38646 679 aaKnown RBP14.46□□□□□ -0.1
PAF1-202ENST00000416728 ARL4AP40617 200 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 KLHL30Q0D2K2 578 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 HLTFQ14527 1009 aaKnown RBP eCLIP14.46□□□□□ -0.1
PAF1-202ENST00000416728 SPECC1LQ69YQ0 1117 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 TMCO3Q6UWJ1 677 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 SPRED1Q7Z699 444 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 SFTPA2Q8IWL1 248 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 PELI3Q8N2H9 469 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 BBS5Q8N3I7 341 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 CCL4L1Q8NHW4 92 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 KIAA1524Q8TCG1 905 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 SPOCK2Q92563 424 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 TMEM159Q96B96 161 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 NUS1Q96E22 293 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 COQ10AQ96MF6 247 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 NSMCE3Q96MG7 304 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 SEMA4CQ9C0C4 833 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 CARS2Q9HA77 564 aaKnown RBP14.46□□□□□ -0.1
PAF1-202ENST00000416728 MRPL47Q9HD33 250 aaKnown RBP14.46□□□□□ -0.1
PAF1-202ENST00000416728 PHPT1Q9NRX4 125 aaPredicted RBP14.46□□□□□ -0.1
PAF1-202ENST00000416728 KCTD5Q9NXV2 234 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 AIPL1Q9NZN9 384 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 MYO1AQ9UBC5 1043 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 ACSL6Q9UKU0 697 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 LOXL2Q9Y4K0 774 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 PCDHGC4Q9Y5F7 938 aa14.46□□□□□ -0.1
PAF1-202ENST00000416728 KALRNO60229 2985 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms