RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 KCNK1O00180 336 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 TAF4O00268 1085 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 NME4O00746 187 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 TNPO2O14787 897 aaKnown RBP14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 SNPHO15079 494 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 ASNA1O43681 348 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 GABBR2O75899 941 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 STBD1O95210 358 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 CCT8P50990 548 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 POU5F1BQ06416 359 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 ZNF667Q5HYK9 610 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 XAF1Q6GPH4 301 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 CLEC14AQ86T13 490 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 ADCK1Q86TW2 530 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 BRSK2Q8IWQ3 736 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 ZNF486Q96H40 463 aaPredicted RBP14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 SLC25A23Q9BV35 468 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 CARD8Q9Y2G2 431 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 SYNJ2BP-COX16A0A087WUM0 186 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 CHRM3P20309 590 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 HTR1BP28222 390 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 SHMT2P34897 504 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 C1QTNF8P60827 252 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 NT5DC4Q86YG4 428 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 SLC41A1Q8IVJ1 513 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 SCUBE3Q8IX30 993 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 SPPL2BQ8TCT7 592 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 IL22Q9GZX6 179 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 LTB4R2Q9NPC1 389 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 COX16Q9P0S2 106 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 ADAM28Q9UKQ2 775 aa14.76□□□□□ -0.05
NCKIPSD-204ENST00000416649 ADGRA2Q96PE1 1338 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 GLTPD2A6NH11 291 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 TNFRSF10AO00220 468 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 ACOX3O15254 700 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 FARP2O94887 1054 aaPredicted RBP14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 TUFMP49411 452 aaKnown RBP14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 STAT5BP51692 787 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 IFRD2Q12894 506 aaPredicted RBP14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 GRM1Q13255 1194 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 SQLEQ14534 574 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 SPANXN3Q5MJ09 141 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 KCNMB4Q86W47 210 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 TMEM192Q8IY95 271 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 COLGALT2Q8IYK4 626 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 PYROXD2Q8N2H3 581 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 CDHR1Q96JP9 859 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 QKIQ96PU8 341 aaKnown RBP eCLIP14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 NAT9Q9BTE0 207 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 TRIM15Q9C019 465 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 TRIT1Q9H3H1 467 aaKnown RBP14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 POMKQ9H5K3 350 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 SCUBE2Q9NQ36 999 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 RAD54BQ9Y620 910 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 STYXL1Q9Y6J8 313 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 PARP14Q460N5 1801 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 ILVBLA1L0T0 632 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 BMP4P12644 408 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 MLNP12872 115 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 PTPN2P17706 415 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 GPD2P43304 727 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 PSMD8P48556 350 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 YBX1P67809 324 aaKnown RBP14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 CBLBQ13191 982 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 TBPL2Q6SJ96 375 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 KIAA0408Q6ZU52 694 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 NXNL1Q96CM4 212 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 DACH2Q96NX9 599 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 PCYT2Q99447 389 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 LPIN3Q9BQK8 851 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 ELOVL4Q9GZR5 314 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 LRRC40Q9H9A6 602 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 AKIP1Q9NQ31 210 aa14.75□□□□□ -0.05
NCKIPSD-204ENST00000416649 TIMM44O43615 452 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 ABCB7O75027 752 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 TNNC2P02585 160 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 APOA4P06727 396 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 CHRNB1P11230 501 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 GOT1P17174 413 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 BMPR1AP36894 532 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 LEPRP48357 1165 aaKnown RBP14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 E2F2Q14209 437 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 FUT11Q495W5 492 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 VPS26BQ4G0F5 336 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 CERCAMQ5T4B2 595 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 RSBN1Q5VWQ0 802 aaPredicted RBP14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 RETREG3Q86VR2 466 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 LGI2Q8N0V4 545 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 CLEC4FQ8N1N0 589 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 ATP6V0D2Q8N8Y2 350 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 OR7A2PQ8NGA2 310 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 SDCCAG3Q96C92 435 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 DUS3LQ96G46 650 aaKnown RBP14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 SLC45A3Q96JT2 553 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 ZNF670Q9BS34 389 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 HOXD1Q9GZZ0 328 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 RMND5AQ9H871 391 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 NEK6Q9HC98 313 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 ITM2CQ9NQX7 267 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 BFARQ9NZS9 450 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms