RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CYP4B1P13584 511 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 ARSAP15289 507 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 PNPLA4P41247 253 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 TRPC1P48995 793 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 GLUD2P49448 558 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 TRAF1Q13077 416 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 GPS2Q13227 327 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 PDCD2Q16342 344 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 GXYLT1Q4G148 440 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 SPATA1Q5VX52 437 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 GALNT17Q6IS24 598 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 HEPHL1Q6MZM0 1159 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 C16orf87Q6PH81 154 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 BRINP3Q76B58 766 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 FASTKD5Q7L8L6 764 aaKnown RBP3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 ZNF367Q7RTV3 350 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 KRT222Q8N1A0 295 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 CARNMT1Q8N4J0 409 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 OR8H1Q8NGG4 311 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 TMEM163Q8TC26 289 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 N4BP2L2Q92802 583 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 ATP6V1E2Q96A05 226 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 PHF21BQ96EK2 531 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 KTI12Q96EK9 354 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 ZSCAN31Q96LW9 406 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 TEFMQ96QE5 360 aaKnown RBP3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 FUCA2Q9BTY2 467 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 ISCA1Q9BUE6 129 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 MRPL9Q9BYD2 267 aaKnown RBP3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 KLHL31Q9H511 634 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 PLEKHA2Q9HB19 425 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 PDRG1Q9NUG6 133 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 THAP1Q9NVV9 213 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 NKIRAS2Q9NYR9 191 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 NCKIPSDQ9NZQ3 722 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 IL36RNQ9UBH0 155 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 MYO6Q9UM54 1294 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 RRP7AQ9Y3A4 280 aaKnown RBP3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 RRP15Q9Y3B9 282 aaKnown RBP3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 RAP2CQ9Y3L5 183 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 INSL5Q9Y5Q6 135 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 ITIH6Q6UXX5 1313 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 PIK3C2BO00750 1634 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 ADGRL3Q9HAR2 1447 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 ATP7BP35670 1465 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 ARHGEF40Q8TER5 1519 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TULP4Q9NRJ4 1543 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 GLI2P10070 1586 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 HECW2Q9P2P5 1572 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 RTCAO00442 366 aaKnown RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 HSPB6O14558 160 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 HTATSF1O43719 755 aaKnown RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TPM1P09493 284 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 ACP5P13686 325 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TNNT1P13805 278 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 HSD3B1P14060 373 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 GNLYP22749 145 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 HPDP32754 393 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 AVPR1AP37288 418 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 GRK6P43250 576 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 RFX5P48382 616 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 AARSP49588 968 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 RBM5P52756 815 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 MVDP53602 400 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TUBB4BP68371 445 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 ABATP80404 500 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 CRYZQ08257 329 aaKnown RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TRAF2Q12933 501 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 THOC5Q13769 683 aaKnown RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TWISTNBQ3B726 338 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 LRRC24Q50LG9 513 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 FNBP1LQ5T0N5 605 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 ARMC4Q5T2S8 1044 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 MFSD4BQ5TF39 518 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 KLHL10Q6JEL2 608 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TMEM71Q6P5X7 295 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 CTR9Q6PD62 1173 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 CCBE1Q6UXH8 406 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 SYT13Q7L8C5 426 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 RNF144BQ7Z419 303 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 SPATA2LQ8IUW3 424 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 GALNT15Q8N3T1 639 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 LRRC57Q8N9N7 239 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TEX45Q8NA69 505 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 AFAP1L1Q8TED9 768 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 NUDCD2Q8WVJ2 157 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TRAPPC12Q8WVT3 735 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 CCT6BQ92526 530 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TIGD1Q96MW7 591 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 IFT27Q9BW83 186 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 POLDIP3Q9BY77 421 aaKnown RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TM6SF1Q9BZW5 370 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 CLPBQ9H078 707 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 TMEM51Q9NW97 253 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 BABAM1Q9NWV8 329 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 STK26Q9P289 416 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 KIF17Q9P2E2 1029 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 NFKBIL1Q9UBC1 381 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 RABL2AQ9UBK7 228 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 GRHPRQ9UBQ7 328 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms