RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 LTB4R2Q9NPC1 389 aa10.02□□□□□ -0.81
DDB1-202ENST00000414411 NPDC1Q9NQX5 325 aaPredicted RBP10.02□□□□□ -0.81
DDB1-202ENST00000414411 SEPT10Q9P0V9 454 aa10.02□□□□□ -0.81
DDB1-202ENST00000414411 SLC17A7Q9P2U7 560 aa10.02□□□□□ -0.81
DDB1-202ENST00000414411 ZNF180Q9UJW8 692 aa10.02□□□□□ -0.81
DDB1-202ENST00000414411 USH1CQ9Y6N9 552 aa10.02□□□□□ -0.81
DDB1-202ENST00000414411 OPHN1O60890 802 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 FAM155BO75949 473 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 STK10O94804 968 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 GSTA2P09210 222 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 DHRS4L1P0CG22 281 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 IL12RB1P42701 662 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 ETV4P43268 484 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 RGRP47804 291 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 CSNK1DP48730 415 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 MNAT1P51948 309 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 NEK3P51956 506 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 MRPS21P82921 87 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 SEMA5AQ13591 1074 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 E2F5Q15329 346 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 HNRNPA1L2Q32P51 320 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 C2orf27AQ580R0 203 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 C22orf39Q6P5X5 142 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 TBC1D1Q86TI0 1168 aaPredicted RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 LRRC6Q86X45 466 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 SYNPOQ8N3V7 929 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 PCDH20Q8N6Y1 951 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 IL17RCQ8NAC3 791 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 C10orf82Q8WW14 230 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 NSMCE3Q96MG7 304 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 GLOD4Q9HC38 313 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 NT5MQ9NPB1 228 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 ZDHHC4Q9NPG8 344 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 MRPS17Q9Y2R5 130 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 STON1Q9Y6Q2 735 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 ZDBF2Q9HCK1 2354 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 HGSO14964 777 aaPredicted RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 ADAM23O75077 832 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 MMP2P08253 660 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 NQO1P15559 274 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 CES1P23141 567 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 SEC13P55735 322 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 MAXP61244 160 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 RHOAP61586 193 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 ST8SIA6P61647 398 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 KCNJ2P63252 427 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 SIGLEC14Q08ET2 396 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 NIPAL4Q0D2K0 466 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 ZNF235Q14590 738 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 SETDB1Q15047 1291 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 ACCSLQ4AC99 568 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 FNDC3BQ53EP0 1204 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 C9orf64Q5T6V5 341 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 SERPINA13PQ6UXR4 307 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 UNC5AQ6ZN44 842 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 ASRGL1Q7L266 308 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 KLHDC8BQ8IXV7 354 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 BBS5Q8N3I7 341 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 PPM1NQ8N819 430 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 OR2A12Q8NGT7 310 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 TADA1Q96BN2 335 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 KLHL29Q96CT2 875 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 THOC1Q96FV9 657 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 IMP4Q96G21 291 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 SIGLEC10Q96LC7 697 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 GABRG3Q99928 467 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 GORASP1Q9BQQ3 440 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 CINPQ9BW66 212 aaPredicted RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 OSBPL6Q9BZF3 934 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 POLR1EQ9GZS1 481 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 SLC25A51Q9H1U9 297 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 TNKS2Q9H2K2 1166 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 C12orf65Q9H3J6 166 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 MTG2Q9H4K7 406 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 XAB2Q9HCS7 855 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 CD248Q9HCU0 757 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 CACNA2D2Q9NY47 1150 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 KLHL8Q9P2G9 620 aaPredicted RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 NDRG2Q9UN36 371 aaKnown RBP10.01□□□□□ -0.81
DDB1-202ENST00000414411 CHKBQ9Y259 395 aa10.01□□□□□ -0.81
DDB1-202ENST00000414411 ANKRD36A6QL64 1941 aa10□□□□□ -0.81
DDB1-202ENST00000414411 TTC24A2A3L6 582 aaPredicted RBP10□□□□□ -0.81
DDB1-202ENST00000414411 FAM170BA6NMN3 283 aa10□□□□□ -0.81
DDB1-202ENST00000414411 CXorf49A8MYA2 514 aaPredicted RBP10□□□□□ -0.81
DDB1-202ENST00000414411 TRIM49D1C9J1S8 452 aa10□□□□□ -0.81
DDB1-202ENST00000414411 CHUKO15111 745 aa10□□□□□ -0.81
DDB1-202ENST00000414411 DCXO43602 365 aa10□□□□□ -0.81
DDB1-202ENST00000414411 GJB3O75712 270 aa10□□□□□ -0.81
DDB1-202ENST00000414411 DCTN3O75935 186 aa10□□□□□ -0.81
DDB1-202ENST00000414411 KRT37O76014 449 aa10□□□□□ -0.81
DDB1-202ENST00000414411 UNC5CO95185 931 aa10□□□□□ -0.81
DDB1-202ENST00000414411 GSRP00390 522 aa10□□□□□ -0.81
DDB1-202ENST00000414411 HLA-EP13747 358 aa10□□□□□ -0.81
DDB1-202ENST00000414411 ALDH3A1P30838 453 aa10□□□□□ -0.81
DDB1-202ENST00000414411 NTSR1P30989 418 aa10□□□□□ -0.81
DDB1-202ENST00000414411 RIPK1Q13546 671 aa10□□□□□ -0.81
DDB1-202ENST00000414411 PARP6Q2NL67 630 aa10□□□□□ -0.81
DDB1-202ENST00000414411 MYLK3Q32MK0 819 aa10□□□□□ -0.81
DDB1-202ENST00000414411 HSF5Q4G112 596 aaPredicted RBP10□□□□□ -0.81
DDB1-202ENST00000414411 CARD16Q5EG05 197 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms