RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 HSD11B1LQ7Z5J1 315 aa26.38■■□□□ 1.81
VEGFA-207ENST00000413642 RHOT1Q8IXI2 618 aa26.38■■□□□ 1.81
VEGFA-207ENST00000413642 CCDC13Q8IYE1 715 aa26.38■■□□□ 1.81
VEGFA-207ENST00000413642 MDM1Q8TC05 714 aa26.38■■□□□ 1.81
VEGFA-207ENST00000413642 BTN2A2Q8WVV5 523 aa26.38■■□□□ 1.81
VEGFA-207ENST00000413642 HDAC11Q96DB2 347 aa26.38■■□□□ 1.81
VEGFA-207ENST00000413642 ARID1BQ8NFD5 2236 aaPredicted RBP26.38■■□□□ 1.81
VEGFA-207ENST00000413642 PLXNB3Q9ULL4 1909 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 SPOPO43791 374 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 FZD6O60353 706 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 JCHAINP01591 159 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 JUPP14923 745 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 TSHRP16473 764 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 DYNLT1P63172 113 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 ILKQ13418 452 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 MFSD7Q6UXD7 560 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 RFX6Q8HWS3 928 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 CBARPQ8N350 705 aaPredicted RBP26.37■■□□□ 1.81
VEGFA-207ENST00000413642 FAM181AQ8N9Y4 354 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.37■■□□□ 1.81
VEGFA-207ENST00000413642 FATE1Q969F0 183 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 DUSP23Q9BVJ7 150 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 SLC13A1Q9BZW2 595 aa26.37■■□□□ 1.81
VEGFA-207ENST00000413642 SOWAHDA6NJG2 315 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 APOL1O14791 398 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 HNF1BP35680 557 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 ETV3P41162 512 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 INSM1Q01101 510 aaPredicted RBP26.36■■□□□ 1.81
VEGFA-207ENST00000413642 ZBTB17Q13105 803 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 TARDBPQ13148 414 aaKnown RBP eCLIP26.36■■□□□ 1.813e-6■■■■□ 20.1
VEGFA-207ENST00000413642 ALG1LQ6GMV1 187 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 RFLNAQ6ZTI6 216 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 CNTD1Q8N815 330 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 SCRN2Q96FV2 425 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 MCCC1Q96RQ3 725 aaPredicted RBP26.36■■□□□ 1.81
VEGFA-207ENST00000413642 IL12RB2Q99665 862 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 LGR4Q9BXB1 951 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 MAK16Q9BXY0 300 aaKnown RBP26.36■■□□□ 1.81
VEGFA-207ENST00000413642 CEP41Q9BYV8 373 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 CHKBQ9Y259 395 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 ALG6Q9Y672 507 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 PTPRBP23467 1997 aa26.36■■□□□ 1.81
VEGFA-207ENST00000413642 TMEM202A6NGA9 273 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 ZNF487B1APH4 448 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 YY2O15391 372 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 CYP2A6P11509 494 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-207ENST00000413642 CDK4P11802 303 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 HTR1BP28222 390 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 HK3P52790 923 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 SRP54P61011 504 aaKnown RBP26.35■■□□□ 1.81
VEGFA-207ENST00000413642 PPIDQ08752 370 aaKnown RBP26.35■■□□□ 1.81
VEGFA-207ENST00000413642 CDKN3Q16667 212 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 ZCCHC8Q6NZY4 707 aaKnown RBP26.35■■□□□ 1.81
VEGFA-207ENST00000413642 PNCKQ6P2M8 343 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 CCDC170Q8IYT3 715 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 TPCN2Q8NHX9 752 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 OR1E3Q8WZA6 343 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 NUS1Q96E22 293 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 PDXPQ96GD0 296 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 WDR92Q96MX6 357 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 ZNF830Q96NB3 372 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-207ENST00000413642 KLQ9UEF7 1012 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 SALL4Q9UJQ4 1053 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 USP24Q9UPU5 2620 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 PPIL1Q9Y3C6 166 aa26.35■■□□□ 1.81
VEGFA-207ENST00000413642 IGF2RP11717 2491 aa26.34■■□□□ 1.81
VEGFA-207ENST00000413642 RCCD1A6NED2 376 aa26.34■■□□□ 1.81
VEGFA-207ENST00000413642 SRRM3A6NNA2 597 aaPredicted RBP26.34■■□□□ 1.81
VEGFA-207ENST00000413642 RASGRP1O95267 797 aa26.34■■□□□ 1.81
VEGFA-207ENST00000413642 PRLP01236 227 aa26.34■■□□□ 1.81
VEGFA-207ENST00000413642 KRT10P13645 584 aa26.34■■□□□ 1.81
VEGFA-207ENST00000413642 HADHBP55084 474 aaKnown RBP26.34■■□□□ 1.81
VEGFA-207ENST00000413642 SPA17Q15506 151 aa26.34■■□□□ 1.81
VEGFA-207ENST00000413642 Q6ZVL8 140 aa26.34■■□□□ 1.81
VEGFA-207ENST00000413642 PANX2Q96RD6 677 aa26.34■■□□□ 1.81
VEGFA-207ENST00000413642 TDRD1Q9BXT4 1180 aaKnown RBP26.34■■□□□ 1.81
VEGFA-207ENST00000413642 CCDC86Q9H6F5 360 aaKnown RBP26.34■■□□□ 1.81
VEGFA-207ENST00000413642 FGF22Q9HCT0 170 aa26.34■■□□□ 1.81
VEGFA-207ENST00000413642 MRPL40Q9NQ50 206 aaKnown RBP26.34■■□□□ 1.81
VEGFA-207ENST00000413642 DDX56Q9NY93 547 aaKnown RBP26.34■■□□□ 1.81
VEGFA-207ENST00000413642 SAE1Q9UBE0 346 aaPredicted RBP26.34■■□□□ 1.81
VEGFA-207ENST00000413642 LRRK1Q38SD2 2015 aa26.34■■□□□ 1.81
VEGFA-207ENST00000413642 TDRD6O60522 2096 aaKnown RBP26.34■■□□□ 1.81
VEGFA-207ENST00000413642 CPED1A4D0V7 1026 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 LMO7DNF2Z398 122 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 TPP1O14773 563 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 ANXA6P08133 673 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 MMP2P08253 660 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 CYLC1P35663 651 aaPredicted RBP26.33■■□□□ 1.81
VEGFA-207ENST00000413642 TRIM23P36406 574 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 MARCKSL1P49006 195 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 KIAA1024LP59773 190 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 CYP4F3Q08477 520 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 AP1B1Q10567 949 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 ESRP1Q6NXG1 681 aaKnown RBP26.33■■□□□ 1.81
VEGFA-207ENST00000413642 GUSBP11Q6P575 273 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 CRTC1Q6UUV9 634 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 USP45Q70EL2 814 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 VSIG1Q86XK7 387 aa26.33■■□□□ 1.81
VEGFA-207ENST00000413642 DTD2Q96FN9 168 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms