RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SETD1AO15047 1707 aaKnown RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 STRCP1A6NGW2 1772 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CACNA1SQ13698 1873 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 NCKAP5O14513 1909 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CACNA1BQ00975 2339 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D3DA0A087WVF3 549 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 IGKV2-40A0A087WW87 121 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D3IA0A087WXS9 549 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D3EA0A087X179 549 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D3KA0A087X1G2 549 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 A0A1W2PNN7 141 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 FAM168BA1KXE4 195 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D3BA6NDS4 549 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D3FA6NER0 549 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRSS29PA6NIE9 313 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 A6NNZ2 444 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D3LB9A6J9 549 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 M0R2C6 588 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 GRM8O00222 908 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CHL1O00533 1208 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 ADCY6O43306 1168 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 GREM1O60565 184 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TSPAN3O60637 253 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 DTNBO60941 627 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 EFCAB14O75071 495 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 USP12O75317 370 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF217O75362 1048 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 ERLIN1O75477 346 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 SEMA4FO95754 770 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 IGKV2D-40P01614 121 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CENPBP07199 599 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D3HP0C7X1 549 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TRIM49P0CI25 452 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TRIM49CP0CI26 452 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 IGLL1P15814 213 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF18P17022 549 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 BCL3P20749 454 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 HNF1AP20823 631 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 PAX3P23760 479 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 IDUAP35475 653 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 PBX3P40426 434 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CDX1P47902 265 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 RASSF2P50749 326 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 BNC1Q01954 994 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 GAD2Q05329 585 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRKG1Q13976 671 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CAMK1Q14012 370 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 DPYSQ14117 519 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF235Q14590 738 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 NECTIN1Q15223 517 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 IRF4Q15306 451 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 FAM83EQ2M2I3 478 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TTC31Q49AM3 519 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CBWD6Q4V339 395 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 FSCBQ5H9T9 825 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CBWD3Q5JTY5 395 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CBWD5Q5RIA9 395 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D3GQ6DHY5 549 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D3CQ6IPX1 549 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 LIN54Q6MZP7 749 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 C16orf87Q6PH81 154 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 LMBR1LQ6UX01 489 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 VSTM1Q6UX27 236 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 RUFY4Q6ZNE9 571 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 QSOX2Q6ZRP7 698 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 MTSS1LQ765P7 747 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF367Q7RTV3 350 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CEACAM19Q7Z692 300 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 NOP9Q86U38 636 aaKnown RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 ERICH1Q86X53 443 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 PALB2Q86YC2 1186 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 MCF2L2Q86YR7 1114 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 APLFQ8IW19 511 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 LAX1Q8IWV1 398 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBC1D3Q8IZP1 549 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 MT1MQ8N339 61 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF664Q8N3J9 261 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 Q8N6K4 173 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 POMGNT2Q8NAT1 580 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 INO80EQ8NBZ0 244 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CTHRC1Q96CG8 243 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 EGLN2Q96KS0 407 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CALR3Q96L12 384 aaKnown RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 GAL3ST4Q96RP7 486 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CCNL2Q96S94 520 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPIN2AQ99865 258 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CITED2Q99967 270 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPIN2BQ9BPZ2 258 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 PAXXQ9BUH6 204 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TIMM21Q9BVV7 248 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 JMJD4Q9H9V9 463 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 PCDH9Q9HC56 1237 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 TAB2Q9NYJ8 693 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 CPNE7Q9UBL6 633 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 MRPS28Q9Y2Q9 187 aaKnown RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 SF3B1O75533 1304 aaKnown RBP eCLIP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 ADGRL1O94910 1474 aa-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 RAI1Q7Z5J4 1906 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-88P-201ENST00000411220 ESYT2A0FGR8 921 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 LINC01553A4QN01 128 aa-1.53□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms